About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023810-T1
LLU|FUN_023811-T1MIXED LINEAGE PROTEIN KINASE
LLU|FUN_023812-T1MIXED LINEAGE PROTEIN KINASE
LLU|FUN_023813-T1
LLU|FUN_023814-T1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
LLU|FUN_023815-T1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
LLU|FUN_023816-T1
LLU|FUN_023817-T1
LLU|FUN_023818-T1ENHANCER OF MRNA-DECAPPING PROTEIN 4
LLU|FUN_023819-T1DNA REPAIR-SCAFFOLDING PROTEIN SPIDR
LLU|FUN_023820-T1CCAAT/ENHANCER BINDING PROTEIN
LLU|FUN_023821-T1CCAAT/ENHANCER BINDING PROTEIN
LLU|FUN_023822-T1LEUKOCYTE RECEPTOR CLUSTER LRC MEMBER 1
LLU|FUN_023823-T1PHOSPHOGLYCOLATE PHOSPHATASE
LLU|FUN_023824-T1
LLU|FUN_023825-T1
LLU|FUN_023826-T1PROTEIN ARGININE N-METHYLTRANSFERASE
LLU|FUN_023827-T1CYTOCHROME C1
LLU|FUN_023828-T1EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
LLU|FUN_023829-T1PALMITOYLTRANSFERASE ZDHHC16
LLU|FUN_023830-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_023831-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_023832-T1
LLU|FUN_023833-T1G-PROTEIN COUPLED RECEPTOR 158-RELATED
LLU|FUN_023834-T1
LLU|FUN_023835-T1
LLU|FUN_023836-T1PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED
LLU|FUN_023837-T1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
LLU|FUN_023838-T1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
LLU|FUN_023839-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_023840-T1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
LLU|FUN_023841-T1
LLU|FUN_023842-T1ARGINYL-TRNA SYNTHETASE
LLU|FUN_023843-T1UNCHARACTERIZED
LLU|FUN_023844-T1
LLU|FUN_023845-T1
LLU|FUN_023846-T1
LLU|FUN_023847-T1
LLU|FUN_023848-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_023849-T1
LLU|FUN_023850-T1
LLU|FUN_023851-T1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
LLU|FUN_023852-T1
LLU|FUN_023853-T1
LLU|FUN_023854-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_023855-T1
LLU|FUN_023856-T1
LLU|FUN_023857-T1TRANSMEMBRANE PROTEIN 180
LLU|FUN_023858-T1
LLU|FUN_023859-T1LIPASE
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