About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023911-T1
LLU|FUN_023912-T1METHANETHIOL OXIDASE
LLU|FUN_023913-T1METHANETHIOL OXIDASE
LLU|FUN_023914-T1OS10G0105400 PROTEIN
LLU|FUN_023915-T1ADENINE DNA GLYCOSYLASE
LLU|FUN_023916-T1
LLU|FUN_023917-T1
LLU|FUN_023918-T1
LLU|FUN_023919-T1MOLTING PROTEIN MLT-4
LLU|FUN_023920-T14-NITROPHENYLPHOSPHATASE-RELATED
LLU|FUN_023921-T1HISTONE H3
LLU|FUN_023922-T1HISTONE H2B
LLU|FUN_023923-T1GLYCOPROTEIN 38
LLU|FUN_023924-T1
LLU|FUN_023925-T1RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
LLU|FUN_023926-T1NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58
LLU|FUN_023927-T1
LLU|FUN_023928-T1
LLU|FUN_023929-T1
LLU|FUN_023930-T1
LLU|FUN_023931-T1UNCHARACTERIZED
LLU|FUN_023932-T1DYNEIN INTERMEDIATE CHAIN
LLU|FUN_023933-T1C10ORF188 FAMILY MEMBER
LLU|FUN_023934-T1UBIQUITIN-LIKE DOMAIN-CONTAINING CTD PHOSPHATASE 1
LLU|FUN_023935-T1
LLU|FUN_023936-T1HUNTINGTON DISEASE PROTEIN
LLU|FUN_023937-T1
LLU|FUN_023938-T1
LLU|FUN_023939-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_023940-T1
LLU|FUN_023941-T1
LLU|FUN_023942-T1
LLU|FUN_023943-T1
LLU|FUN_023944-T1GDNF RECEPTOR ALPHA
LLU|FUN_023945-T1ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
LLU|FUN_023946-T1PERIAXIN/AHNAK
LLU|FUN_023947-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_023948-T1
LLU|FUN_023949-T1COLLAGEN ALPHA
LLU|FUN_023950-T1
LLU|FUN_023951-T1
LLU|FUN_023952-T1
LLU|FUN_023953-T1
LLU|FUN_023954-T1
LLU|FUN_023955-T1DNA POLYMERASE CATALYTIC SUBUNIT
LLU|FUN_023956-T1ARYLSULFATASE
LLU|FUN_023957-T1ARYLSULFATASE
LLU|FUN_023958-T1
LLU|FUN_023959-T1POLY [ADP-RIBOSE] POLYMERASE
LLU|FUN_023960-T1POLY [ADP-RIBOSE] POLYMERASE
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