About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_024061-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_024062-T1
LLU|FUN_024063-T1
LLU|FUN_024064-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_024065-T1
LLU|FUN_024066-T1PROTEIN HINDERIN
LLU|FUN_024067-T1
LLU|FUN_024068-T1
LLU|FUN_024069-T1
LLU|FUN_024070-T1
LLU|FUN_024071-T1
LLU|FUN_024072-T1E3 UBIQUITIN-PROTEIN LIGASE TRIP12
LLU|FUN_024073-T1
LLU|FUN_024074-T1
LLU|FUN_024075-T1CENTROMERE PROTEIN E
LLU|FUN_024076-T1
LLU|FUN_024077-T1TEKTIN
LLU|FUN_024078-T1
LLU|FUN_024079-T1
LLU|FUN_024080-T1
LLU|FUN_024081-T1SYNTAXIN
LLU|FUN_024082-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_024083-T1RHO-GTPASE-ACTIVATING PROTEIN LRG1
LLU|FUN_024084-T1N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE
LLU|FUN_024085-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25
LLU|FUN_024086-T1-
LLU|FUN_024087-T1
LLU|FUN_024088-T1VILLIN
LLU|FUN_024089-T1VILLIN
LLU|FUN_024090-T1ARRESTIN DOMAIN CONTAINING PROTEIN
LLU|FUN_024091-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_024092-T1CARBOHYDRATE SULFOTRANSFERASE
LLU|FUN_024093-T1IG-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_024094-T1
LLU|FUN_024095-T1FIBRILLIN-RELATED
LLU|FUN_024096-T1
LLU|FUN_024098-T1
LLU|FUN_024099-T1
LLU|FUN_024100-T1
LLU|FUN_024101-T1
LLU|FUN_024102-T1OTU DOMAIN CONTAINING PROTEIN
LLU|FUN_024103-T1LYSYL-TRNA SYNTHETASE
LLU|FUN_024104-T1S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN
LLU|FUN_024105-T1S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN
LLU|FUN_024106-T1
LLU|FUN_024107-T1S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN
LLU|FUN_024108-T1PX SERINE/THREONINE KINASE PXK
LLU|FUN_024109-T1
LLU|FUN_024110-T1SPHINGOMYELINASE FAMILY MEMBER
LLU|FUN_024111-T1ATM INTERACTOR
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