About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_024212-T1
LLU|FUN_024213-T1
LLU|FUN_024214-T1
LLU|FUN_024215-T1
LLU|FUN_024216-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_024217-T1
LLU|FUN_024218-T1LIM DOMAIN KINASE 1
LLU|FUN_024219-T1
LLU|FUN_024220-T1
LLU|FUN_024221-T1FATTY ACID SYNTHASE
LLU|FUN_024222-T1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_024223-T1
LLU|FUN_024224-T1UNCHARACTERIZED
LLU|FUN_024225-T1
LLU|FUN_024226-T1PEPTIDASE
LLU|FUN_024227-T1CS DOMAIN-CONTAINING PROTEIN
LLU|FUN_024229-T1
LLU|FUN_024230-T1TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B
LLU|FUN_024231-T1
LLU|FUN_024232-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_024233-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_024234-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_024235-T1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
LLU|FUN_024236-T1
LLU|FUN_024237-T1
LLU|FUN_024238-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_024239-T1SI:CH211-161H7.5-RELATED
LLU|FUN_024240-T1
LLU|FUN_024241-T1
LLU|FUN_024242-T1CENTROSOMAL PROTEIN OF 19K CEP19
LLU|FUN_024243-T1VESICLE-TRAFFICKING PROTEIN SEC22B
LLU|FUN_024244-T1TOLL-LIKE RECEPTOR
LLU|FUN_024245-T1TOLL-LIKE RECEPTOR
LLU|FUN_024246-T1RHOMBOID-RELATED PROTEIN
LLU|FUN_024247-T1
LLU|FUN_024248-T1
LLU|FUN_024249-T1
LLU|FUN_024250-T1INHIBITOR OF APOPTOSIS
LLU|FUN_024251-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_024252-T1
LLU|FUN_024253-T1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_024254-T1
LLU|FUN_024255-T1
LLU|FUN_024256-T1
LLU|FUN_024257-T1
LLU|FUN_024258-T1
LLU|FUN_024259-T1AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN
LLU|FUN_024260-T1
LLU|FUN_024261-T1
LLU|FUN_024262-T1
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