About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023751-T1ZINC FINGER PROTEIN
LLU|FUN_023752-T1
LLU|FUN_023753-T1
LLU|FUN_023754-T1
LLU|FUN_023755-T1SERYL-TRNA SYNTHETASE
LLU|FUN_023756-T1
LLU|FUN_023757-T1
LLU|FUN_023758-T1
LLU|FUN_023759-T1
LLU|FUN_023760-T1
LLU|FUN_023761-T1
LLU|FUN_023762-T1
LLU|FUN_023763-T1
LLU|FUN_023764-T1
LLU|FUN_023765-T1BOLA-LIKE PROTEIN 3
LLU|FUN_023766-T1
LLU|FUN_023767-T1
LLU|FUN_023768-T1
LLU|FUN_023769-T1
LLU|FUN_023770-T1
LLU|FUN_023771-T1
LLU|FUN_023772-T1POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED
LLU|FUN_023773-T1TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
LLU|FUN_023774-T1BETA-LACTAMASE-RELATED
LLU|FUN_023775-T1
LLU|FUN_023776-T1MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L51
LLU|FUN_023777-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_023778-T1CASPASE-ACTIVATED DNASE
LLU|FUN_023779-T1GLYCINE-, GLUTAMATE-, THIENYLCYCLOHEXYLPIPERIDINE-BINDING PROTEIN
LLU|FUN_023787-T1
LLU|FUN_023788-T1
LLU|FUN_023789-T1WNT RELATED
LLU|FUN_023790-T1KRAB AND ZINC FINGER DOMAIN-CONTAINING
LLU|FUN_023793-T1XYLOSIDE XYLOSYLTRANSFERASE 1
LLU|FUN_023794-T1MIGRATION AND INVASION-INHIBITORY PROTEIN
LLU|FUN_023795-T1PHOSPHATIDYLINOSITOL KINASE
LLU|FUN_023796-T1
LLU|FUN_023797-T1
LLU|FUN_023798-T1ZINC FINGER MATRIN-TYPE PROTEIN 3
LLU|FUN_023799-T1
LLU|FUN_023800-T1ZINC FINGER MATRIN-TYPE PROTEIN 3
LLU|FUN_023801-T1
LLU|FUN_023802-T1EPH RECEPTOR A5
LLU|FUN_023803-T1INNER MEMBRANE TRANSPORT PROTEIN YAJR
LLU|FUN_023804-T1METALLOPHOSPHOESTERASE
LLU|FUN_023805-T1METALLOPROTEASE TLDD
LLU|FUN_023806-T1
LLU|FUN_023807-T1
LLU|FUN_023808-T1
LLU|FUN_023809-T1STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN
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