About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_023195-T1-
LLU|FUN_023196-T1
LLU|FUN_023197-T1GROWTH HORMONE-INDUCIBLE SOLUBLE PROTEIN-RELATED
LLU|FUN_023198-T1FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED
LLU|FUN_023199-T1
LLU|FUN_023200-T1VILLIN
LLU|FUN_023201-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_023202-T1SER/THR PROTEIN KINASE ULK4
LLU|FUN_023203-T1TRAFFICKING KINESIN-BINDING PROTEIN
LLU|FUN_023204-T1
LLU|FUN_023205-T1TRAFFICKING KINESIN-BINDING PROTEIN
LLU|FUN_023206-T1
LLU|FUN_023207-T1
LLU|FUN_023208-T1
LLU|FUN_023209-T1AMINO ACID TRANSPORTER
LLU|FUN_023210-T1BETA TRANSDUCIN-RELATED PROTEIN
LLU|FUN_023211-T1
LLU|FUN_023212-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
LLU|FUN_023213-T1
LLU|FUN_023214-T1
LLU|FUN_023215-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
LLU|FUN_023216-T1
LLU|FUN_023217-T1IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG
LLU|FUN_023218-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
LLU|FUN_023219-T1
LLU|FUN_023220-T1
LLU|FUN_023221-T1DETERIN
LLU|FUN_023222-T1
LLU|FUN_023223-T1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
LLU|FUN_023224-T1
LLU|FUN_023225-T1NUCLEOTIDE KINASE
LLU|FUN_023226-T1
LLU|FUN_023227-T1
LLU|FUN_023228-T1
LLU|FUN_023229-T1SERINE/THREONINE-PROTEIN KINASE ATM
LLU|FUN_023230-T1SERINE/THREONINE-PROTEIN KINASE ATM
LLU|FUN_023231-T1
LLU|FUN_023232-T1
LLU|FUN_023233-T1E3 UBIQUITIN-PROTEIN LIGASE RNF8
LLU|FUN_023234-T1
LLU|FUN_023235-T1HIGH-AFFINITY CHOLINE TRANSPORTER 1
LLU|FUN_023236-T1
LLU|FUN_023237-T1
LLU|FUN_023238-T1
LLU|FUN_023239-T1TOLL-LIKE RECEPTOR
LLU|FUN_023240-T1
LLU|FUN_023244-T1
LLU|FUN_023245-T1
LLU|FUN_023246-T1
LLU|FUN_023247-T1
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