About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_022890-T1
LLU|FUN_022891-T1FIBRILLIN-RELATED
LLU|FUN_022892-T1
LLU|FUN_022893-T1FIBRILLIN-RELATED
LLU|FUN_022894-T1
LLU|FUN_022895-T1MOTOR NEURON AND PANCREAS HOMEOBOX PROTEIN
LLU|FUN_022896-T1
LLU|FUN_022897-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_022898-T1LITHOSTATHINE
LLU|FUN_022899-T1LITHOSTATHINE
LLU|FUN_022900-T1
LLU|FUN_022901-T1
LLU|FUN_022902-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
LLU|FUN_022903-T1
LLU|FUN_022904-T1
LLU|FUN_022905-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 3
LLU|FUN_022906-T1
LLU|FUN_022907-T1NON-HOMOLOGOUS END-JOINING FACTOR 1
LLU|FUN_022908-T1
LLU|FUN_022909-T1
LLU|FUN_022910-T1
LLU|FUN_022911-T1
LLU|FUN_022912-T1
LLU|FUN_022913-T1
LLU|FUN_022914-T1
LLU|FUN_022915-T1HEDGEHOG
LLU|FUN_022916-T1HEDGEHOG
LLU|FUN_022917-T1
LLU|FUN_022918-T1SPHINGOMYELIN PHOSPHODIESTERASE
LLU|FUN_022919-T1
LLU|FUN_022920-T1ANKYRIN REPEAT FAMILY PROTEIN
LLU|FUN_022921-T1PROTEIN CDV3 HOMOLOG
LLU|FUN_022923-T1SOLUTE CARRIER FAMILY 39
LLU|FUN_022924-T1
LLU|FUN_022925-T1PYRUVATE DEHYDROGENASE KINASE
LLU|FUN_022926-T1DNA REPLICATION REGULATOR DPB11-RELATED
LLU|FUN_022927-T1SMARCE1 REGULATOR OF CHROMATIN
LLU|FUN_022928-T1CONDENSIN-2 COMPLEX SUBUNIT G2
LLU|FUN_022929-T1FAST LEU-RICH DOMAIN-CONTAINING
LLU|FUN_022930-T1
LLU|FUN_022931-T1HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN
LLU|FUN_022932-T1CHROMOBOX PROTEIN
LLU|FUN_022933-T1
LLU|FUN_022934-T1HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN
LLU|FUN_022935-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
LLU|FUN_022936-T1TROPONIN C-AKIN-1 PROTEIN
LLU|FUN_022937-T1
LLU|FUN_022938-T1
LLU|FUN_022939-T1SEMAPHORIN
LLU|FUN_022940-T1
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