About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020623-T1RAS GTPASE-ACTIVATING PROTEINS
LLU|FUN_020624-T1
LLU|FUN_020625-T1SPINSTER
LLU|FUN_020626-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
LLU|FUN_020627-T1
LLU|FUN_020628-T1
LLU|FUN_020629-T1
LLU|FUN_020630-T1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
LLU|FUN_020631-T1
LLU|FUN_020632-T1
LLU|FUN_020633-T1GUANYLYL CYCLASE
LLU|FUN_020634-T1GUANYLYL CYCLASE
LLU|FUN_020635-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_020636-T1GUANYLYL CYCLASE
LLU|FUN_020637-T1
LLU|FUN_020638-T1
LLU|FUN_020639-T1
LLU|FUN_020640-T1
LLU|FUN_020641-T1GUANYLYL CYCLASE
LLU|FUN_020642-T1GUANYLYL CYCLASE
LLU|FUN_020643-T1
LLU|FUN_020644-T1WD-40 REPEAT PROTEIN
LLU|FUN_020645-T1
LLU|FUN_020646-T1WD-40 REPEAT PROTEIN
LLU|FUN_020647-T1CRUMBS FAMILY MEMBER
LLU|FUN_020648-T1
LLU|FUN_020649-T1
LLU|FUN_020650-T1
LLU|FUN_020651-T1
LLU|FUN_020652-T1NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
LLU|FUN_020653-T1UNCHARACTERIZED
LLU|FUN_020654-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
LLU|FUN_020655-T1POLYCOMB PROTEIN
LLU|FUN_020656-T1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
LLU|FUN_020657-T1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
LLU|FUN_020658-T1GOLGI-ASSOCIATED PDZ AND COILED-COIL MOTIF-CONTAINING
LLU|FUN_020659-T1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
LLU|FUN_020660-T1ACETYLTRANSFERASE
LLU|FUN_020661-T1
LLU|FUN_020662-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_020663-T1RYANODINE RECEPTOR AND IP3 RECEPTOR
LLU|FUN_020664-T1
LLU|FUN_020665-T1
LLU|FUN_020666-T1RYANODINE RECEPTOR AND IP3 RECEPTOR
LLU|FUN_020667-T1
LLU|FUN_020668-T1
LLU|FUN_020669-T1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
LLU|FUN_020670-T1
LLU|FUN_020671-T1
LLU|FUN_020672-T1
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