About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020321-T1CDC42 GTPASE-ACTIVATING PROTEIN
LLU|FUN_020322-T1COATOMER SUBUNIT DELTA
LLU|FUN_020323-T1UNCHARACTERIZED
LLU|FUN_020324-T1
LLU|FUN_020325-T1PORPHOBILINOGEN DEAMINASE
LLU|FUN_020326-T1EPM2A-INTERACTING PROTEIN 1
LLU|FUN_020327-T1ZINC FINGER PROTEIN
LLU|FUN_020328-T1
LLU|FUN_020329-T1
LLU|FUN_020332-T1PASIFLORA 1, ISOFORM A-RELATED
LLU|FUN_020333-T1PROTOPORPHYRINOGEN OXIDASE
LLU|FUN_020334-T1
LLU|FUN_020335-T1
LLU|FUN_020336-T1
LLU|FUN_020337-T1
LLU|FUN_020338-T1
LLU|FUN_020339-T1
LLU|FUN_020340-T1
LLU|FUN_020341-T1
LLU|FUN_020342-T1
LLU|FUN_020343-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_020344-T1SYNAPTOBREVIN FAMILY MEMBER
LLU|FUN_020345-T1PUTATIVE ATP-ASE
LLU|FUN_020346-T1ATP DEPENDENT LON PROTEASE FAMILY MEMBER
LLU|FUN_020347-T1MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
LLU|FUN_020348-T1UNCHARACTERIZED
LLU|FUN_020349-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_020350-T1RAN BINDING PROTEIN 9-RELATED
LLU|FUN_020351-T1TRANSLIN-ASSOCIATED FACTOR X-INTERACTING PROTEIN 1
LLU|FUN_020352-T1TRANSLIN-ASSOCIATED FACTOR X-INTERACTING PROTEIN 1
LLU|FUN_020353-T1TRANSLIN-ASSOCIATED FACTOR X-INTERACTING PROTEIN 1
LLU|FUN_020354-T1PHOSPHATIDYLINOSITOL GLYCAN, CLASS N
LLU|FUN_020355-T1PHOSPHATIDYLINOSITOL GLYCAN, CLASS N
LLU|FUN_020356-T1
LLU|FUN_020357-T1
LLU|FUN_020358-T1
LLU|FUN_020359-T1
LLU|FUN_020360-T1
LLU|FUN_020361-T1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
LLU|FUN_020362-T1
LLU|FUN_020363-T1
LLU|FUN_020364-T1
LLU|FUN_020365-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
LLU|FUN_020366-T1
LLU|FUN_020367-T1
LLU|FUN_020368-T1
LLU|FUN_020369-T1
LLU|FUN_020370-T1
LLU|FUN_020371-T1METABOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_020372-T1METABOTROPIC GLUTAMATE RECEPTOR
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