About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020020-T1
LLU|FUN_020021-T1NOT56 - RELATED
LLU|FUN_020022-T1FOLATE RECEPTOR
LLU|FUN_020023-T1NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
LLU|FUN_020024-T1CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED
LLU|FUN_020025-T1PROTEIN EVA-1
LLU|FUN_020026-T1DDB1- AND CUL4-ASSOCIATED FACTOR 17
LLU|FUN_020027-T1DDB1- AND CUL4-ASSOCIATED FACTOR 17
LLU|FUN_020028-T1PROTEIN RER1
LLU|FUN_020029-T1
LLU|FUN_020030-T1
LLU|FUN_020031-T1
LLU|FUN_020032-T1
LLU|FUN_020033-T1
LLU|FUN_020034-T1
LLU|FUN_020035-T1NUCLEAR RECEPTOR COACTIVATOR 5-RELATED
LLU|FUN_020036-T1
LLU|FUN_020037-T1
LLU|FUN_020038-T1
LLU|FUN_020039-T1
LLU|FUN_020040-T1
LLU|FUN_020041-T1
LLU|FUN_020042-T1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9
LLU|FUN_020043-T1CYTOKINE RECEPTOR
LLU|FUN_020044-T1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_020045-T1
LLU|FUN_020046-T1
LLU|FUN_020047-T1
LLU|FUN_020048-T1D-ERYTHRULOSE REDUCTASE
LLU|FUN_020049-T1PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED
LLU|FUN_020050-T1SIMILAR TO HYPOTHETICAL PROTEIN
LLU|FUN_020051-T13'-5' EXORIBONUCLEASE CSL4-RELATED
LLU|FUN_020052-T1
LLU|FUN_020053-T1
LLU|FUN_020054-T1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
LLU|FUN_020055-T1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
LLU|FUN_020056-T1
LLU|FUN_020057-T1
LLU|FUN_020058-T1
LLU|FUN_020059-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_020060-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_020061-T1
LLU|FUN_020062-T1PARAOXONASE
LLU|FUN_020063-T1PARAOXONASE
LLU|FUN_020064-T1
LLU|FUN_020065-T1
LLU|FUN_020066-T1
LLU|FUN_020067-T1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
LLU|FUN_020068-T1OS10G0105400 PROTEIN
LLU|FUN_020069-T1
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