About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019865-T1YDJC DEACETYLASE FAMILY MEMBER
LLU|FUN_019866-T1
LLU|FUN_019867-T1
LLU|FUN_019868-T1
LLU|FUN_019869-T1
LLU|FUN_019870-T1
LLU|FUN_019871-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_019872-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_019873-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_019874-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_019875-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_019876-T1
LLU|FUN_019877-T1CALPAIN
LLU|FUN_019878-T1GUANINE NUCLEOTIDE EXCHANGE FACTOR
LLU|FUN_019879-T1VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
LLU|FUN_019880-T1APOPTOGENIC PROTEIN 1, MITOCHONDRIAL
LLU|FUN_019881-T1
LLU|FUN_019882-T1
LLU|FUN_019883-T1
LLU|FUN_019884-T1HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
LLU|FUN_019885-T1
LLU|FUN_019886-T1
LLU|FUN_019887-T1
LLU|FUN_019888-T1
LLU|FUN_019889-T1
LLU|FUN_019890-T1
LLU|FUN_019891-T1COILIN
LLU|FUN_019895-T1SIMILAR TO CDNA SEQUENCE BC052040
LLU|FUN_019896-T160S RIBOSOMAL PROTEIN L12
LLU|FUN_019897-T1UNCHARACTERIZED
LLU|FUN_019898-T1
LLU|FUN_019899-T1
LLU|FUN_019900-T1SCY1-RELATED S/T PROTEIN KINASE-LIKE
LLU|FUN_019901-T13'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1
LLU|FUN_019902-T1PURPLE ACID PHOSPHATASE
LLU|FUN_019903-T1ARV1
LLU|FUN_019904-T1
LLU|FUN_019905-T1
LLU|FUN_019906-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_019907-T1
LLU|FUN_019908-T1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
LLU|FUN_019909-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_019910-T1
LLU|FUN_019911-T1
LLU|FUN_019912-T1
LLU|FUN_019913-T1
LLU|FUN_019914-T1
LLU|FUN_019915-T1REPETIN
LLU|FUN_019916-T1
LLU|FUN_019917-T1
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