About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019969-T1
LLU|FUN_019970-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_019971-T1
LLU|FUN_019972-T1
LLU|FUN_019973-T1
LLU|FUN_019974-T1CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P
LLU|FUN_019975-T1UNCHARACTERIZED
LLU|FUN_019976-T1TRANSKETOLASE
LLU|FUN_019977-T1DOWN REGULATED IN RENAL CARCINOMA 1/TU3A
LLU|FUN_019979-T1UBX-RELATED
LLU|FUN_019980-T1PURPLE ACID PHOSPHATASE
LLU|FUN_019981-T1
LLU|FUN_019982-T1
LLU|FUN_019983-T1
LLU|FUN_019984-T1
LLU|FUN_019985-T1TRANSMEMBRANE PROTEIN 206
LLU|FUN_019986-T1
LLU|FUN_019987-T1
LLU|FUN_019988-T1
LLU|FUN_019989-T1
LLU|FUN_019990-T1
LLU|FUN_019991-T1
LLU|FUN_019992-T1N-LYSINE METHYLTRANSFERASE KMT5A
LLU|FUN_019993-T1
LLU|FUN_019994-T1
LLU|FUN_019995-T1
LLU|FUN_019996-T1
LLU|FUN_019997-T1
LLU|FUN_019998-T1INNEXIN
LLU|FUN_019999-T1
LLU|FUN_020000-T1
LLU|FUN_020001-T1
LLU|FUN_020002-T1
LLU|FUN_020003-T1
LLU|FUN_020004-T1
LLU|FUN_020005-T1
LLU|FUN_020006-T1
LLU|FUN_020007-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_020008-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_020009-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_020010-T1MATRIX PROTEIN, PUTATIVE-RELATED
LLU|FUN_020011-T1PROTEIN BARK BEETLE
LLU|FUN_020012-T1
LLU|FUN_020013-T1
LLU|FUN_020014-T1SI:DKEY-31G6.6
LLU|FUN_020015-T1GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA
LLU|FUN_020016-T1TETRATRICOPEPTIDE REPEAT PROTEIN 24
LLU|FUN_020017-T1TRANSFERASE, PUTATIVE-RELATED
LLU|FUN_020018-T1
LLU|FUN_020019-T1
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