About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019763-T1
LLU|FUN_019764-T1
LLU|FUN_019765-T1UNCHARACTERIZED
LLU|FUN_019766-T1
LLU|FUN_019767-T1
LLU|FUN_019768-T1FUKUTIN RELATED PROTEIN
LLU|FUN_019769-T1
LLU|FUN_019770-T1
LLU|FUN_019771-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_019772-T1
LLU|FUN_019773-T1
LLU|FUN_019774-T1GUANYLYL CYCLASE
LLU|FUN_019775-T1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
LLU|FUN_019776-T1
LLU|FUN_019777-T1GUANYLYL CYCLASE
LLU|FUN_019778-T1ETS
LLU|FUN_019779-T1
LLU|FUN_019780-T1
LLU|FUN_019781-T1
LLU|FUN_019782-T1DNA REPAIR/RNA PROCESSING CPSF FAMILY
LLU|FUN_019783-T1IMPORTIN-7, 8, 11
LLU|FUN_019784-T1NADH-CYTOCHROME B5 REDUCTASE
LLU|FUN_019785-T1ADENOSINE DEAMINASE
LLU|FUN_019786-T1SUGAR HYDROLASE-RELATED
LLU|FUN_019787-T1
LLU|FUN_019788-T1
LLU|FUN_019789-T1TUDOR DOMAIN CONTAINING PROTEIN
LLU|FUN_019790-T1OS02G0815200 PROTEIN
LLU|FUN_019791-T1TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE
LLU|FUN_019793-T1
LLU|FUN_019794-T1BETA TRANSDUCIN-RELATED PROTEIN
LLU|FUN_019795-T1CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
LLU|FUN_019796-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_019797-T1
LLU|FUN_019798-T1
LLU|FUN_019799-T1BETA-1,4-GALACTOSYLTRANSFERASE
LLU|FUN_019800-T1
LLU|FUN_019801-T1
LLU|FUN_019802-T1
LLU|FUN_019803-T1
LLU|FUN_019804-T1
LLU|FUN_019805-T1
LLU|FUN_019806-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_019807-T1MRNA-CAPPING ENZYME
LLU|FUN_019808-T1
LLU|FUN_019809-T1
LLU|FUN_019810-T1OVOCHYMASE-RELATED
LLU|FUN_019811-T1MUCIN 4-RELATED
LLU|FUN_019812-T1CRUMBS FAMILY MEMBER
LLU|FUN_019813-T1IRON-SULFUR DOMAIN CONTAINING PROTEIN
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