About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019463-T1
LLU|FUN_019464-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_019465-T1
LLU|FUN_019466-T1
LLU|FUN_019467-T1
LLU|FUN_019468-T1TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED
LLU|FUN_019469-T1
LLU|FUN_019470-T1
LLU|FUN_019471-T1STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
LLU|FUN_019472-T1
LLU|FUN_019473-T1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_019474-T1
LLU|FUN_019475-T1
LLU|FUN_019476-T1GLYCOSYLTRANSFERASE STELLO1-RELATED
LLU|FUN_019477-T1SPIRE
LLU|FUN_019478-T1CRANIOFACIAL DEVELOPMENT PROTEIN 1
LLU|FUN_019479-T1UNCHARACTERIZED
LLU|FUN_019480-T1GLYCOLIPID TRANSFER PROTEIN-RELATED
LLU|FUN_019481-T1C3ORF6 PROTEIN-RELATED
LLU|FUN_019482-T1
LLU|FUN_019483-T1
LLU|FUN_019484-T1
LLU|FUN_019485-T1
LLU|FUN_019486-T1NEPHROCYSTIN-4
LLU|FUN_019487-T1PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P
LLU|FUN_019488-T1PEROXISOMAL MEMBRANE PROTEIN PEX14
LLU|FUN_019489-T1OPSIN
LLU|FUN_019490-T1OPSIN
LLU|FUN_019491-T1OSJNBA0004B13.7 PROTEIN
LLU|FUN_019492-T1OSJNBA0004B13.7 PROTEIN
LLU|FUN_019493-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_019494-T1SRCR DOMAIN-CONTAINING PROTEIN
LLU|FUN_019495-T1RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
LLU|FUN_019496-T1PORCUPINE
LLU|FUN_019497-T1
LLU|FUN_019498-T1
LLU|FUN_019499-T1
LLU|FUN_019500-T1
LLU|FUN_019501-T1
LLU|FUN_019502-T1
LLU|FUN_019503-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
LLU|FUN_019504-T1
LLU|FUN_019505-T1
LLU|FUN_019506-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_019507-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_019508-T1THIOESTERASE
LLU|FUN_019509-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_019510-T1
LLU|FUN_019511-T1CRUMBS FAMILY MEMBER
LLU|FUN_019512-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
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