About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019362-T1SARCOMA ANTIGEN NY-SAR-95-RELATED
LLU|FUN_019363-T1TRANSMEMBRANE PROTEIN 243
LLU|FUN_019364-T1CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1
LLU|FUN_019365-T1SUCCINYL-COA SYNTHETASE BETA CHAIN
LLU|FUN_019366-T1DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
LLU|FUN_019367-T1
LLU|FUN_019368-T1
LLU|FUN_019369-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_019370-T1HISTONE H2A
LLU|FUN_019371-T1HISTONE H2B
LLU|FUN_019372-T1HISTONE H2A
LLU|FUN_019373-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_019374-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_019375-T1
LLU|FUN_019376-T1
LLU|FUN_019377-T1TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED
LLU|FUN_019378-T1LITTLE ELONGATION COMPLEX SUBUNIT 2
LLU|FUN_019379-T1RAS-RELATED PROTEIN RAB
LLU|FUN_019380-T1KINETOCHORE PROTEIN SPC25-RELATED
LLU|FUN_019381-T1LONGEVITY ASSURANCE FACTOR 1 LAG1
LLU|FUN_019382-T1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
LLU|FUN_019383-T160S RIBOSOMAL PROTEIN L27
LLU|FUN_019384-T1DUAL SPECIFICITY PROTEIN PHOSPHATASE 19
LLU|FUN_019385-T1FIDIPIDINE
LLU|FUN_019386-T1
LLU|FUN_019387-T1EG:EG0003.4 PROTEIN-RELATED
LLU|FUN_019388-T1FIDIPIDINE
LLU|FUN_019389-T1HISTONE H2A
LLU|FUN_019390-T1HISTONE H2B
LLU|FUN_019391-T1HISTONE H2A
LLU|FUN_019392-T1
LLU|FUN_019393-T1
LLU|FUN_019394-T1
LLU|FUN_019395-T1
LLU|FUN_019396-T1
LLU|FUN_019397-T1
LLU|FUN_019398-T1
LLU|FUN_019399-T1DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
LLU|FUN_019400-T1
LLU|FUN_019401-T1
LLU|FUN_019402-T1
LLU|FUN_019403-T1HOMEOBOX PROTEIN ARISTALESS
LLU|FUN_019404-T1
LLU|FUN_019405-T1CULLIN
LLU|FUN_019406-T1INSULIN-INDUCED GENE 1
LLU|FUN_019407-T1ADENYLATE CYCLASE TYPE 1
LLU|FUN_019408-T1ADENYLATE CYCLASE TYPE 1
LLU|FUN_019409-T1
LLU|FUN_019410-T1
LLU|FUN_019412-T1
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