About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019513-T1
LLU|FUN_019514-T15'-NUCLEOTIDASE-RELATED
LLU|FUN_019515-T1
LLU|FUN_019516-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_019517-T1
LLU|FUN_019518-T1MACROGLOBULIN / COMPLEMENT
LLU|FUN_019519-T1NEP1/MRA1
LLU|FUN_019520-T1
LLU|FUN_019521-T1CALDESMON
LLU|FUN_019522-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_019523-T1
LLU|FUN_019524-T1
LLU|FUN_019525-T1
LLU|FUN_019526-T1
LLU|FUN_019527-T1
LLU|FUN_019528-T1
LLU|FUN_019529-T1RPA-INTERACTING PROTEIN RPAIN
LLU|FUN_019530-T1
LLU|FUN_019531-T1SH2B ADAPTER PROTEIN
LLU|FUN_019532-T1SEPTIN
LLU|FUN_019533-T1
LLU|FUN_019534-T1
LLU|FUN_019535-T1
LLU|FUN_019536-T1PROTEIN DISPATCHED-RELATED
LLU|FUN_019537-T1COLLAGEN ALPHA
LLU|FUN_019538-T1
LLU|FUN_019539-T1
LLU|FUN_019540-T1MANSC DOMAIN CONTAINING PROTEIN 1
LLU|FUN_019541-T1
LLU|FUN_019542-T1
LLU|FUN_019543-T160 KDA RIBONUCLEOPROTEIN SSA/RO
LLU|FUN_019544-T160 KDA RIBONUCLEOPROTEIN SSA/RO
LLU|FUN_019545-T1
LLU|FUN_019546-T1
LLU|FUN_019547-T1
LLU|FUN_019548-T1
LLU|FUN_019549-T1GUANYLYL CYCLASE
LLU|FUN_019550-T1
LLU|FUN_019551-T1FORKHEAD BOX PROTEIN
LLU|FUN_019552-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_019553-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_019554-T1VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
LLU|FUN_019555-T1
LLU|FUN_019556-T1
LLU|FUN_019557-T1PROTEIN TAG-278-RELATED
LLU|FUN_019558-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_019559-T1
LLU|FUN_019560-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_019561-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
LLU|FUN_019562-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
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