About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019210-T1
LLU|FUN_019211-T1RNA-BINDING PROTEIN RELATED
LLU|FUN_019212-T1WASH COMPLEX SUBUNIT 5
LLU|FUN_019213-T1
LLU|FUN_019214-T1
LLU|FUN_019215-T1
LLU|FUN_019216-T1
LLU|FUN_019217-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_019218-T1
LLU|FUN_019219-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_019220-T1
LLU|FUN_019221-T1
LLU|FUN_019222-T1MUCIN-22
LLU|FUN_019223-T1UBIQUITIN-CONJUGATING ENZYME E2
LLU|FUN_019224-T13'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1
LLU|FUN_019225-T1DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
LLU|FUN_019226-T1
LLU|FUN_019227-T1TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 3
LLU|FUN_019228-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_019229-T1
LLU|FUN_019230-T1
LLU|FUN_019231-T1
LLU|FUN_019232-T1ARMADILLO-TYPE FOLD-RELATED
LLU|FUN_019234-T1NEURALIZED
LLU|FUN_019235-T1
LLU|FUN_019236-T1
LLU|FUN_019237-T1TRANSLATION ELONGATION FACTOR-RELATED
LLU|FUN_019238-T1
LLU|FUN_019239-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_019240-T1TOLL-LIKE RECEPTOR
LLU|FUN_019241-T1
LLU|FUN_019242-T1TUBERIN
LLU|FUN_019243-T1
LLU|FUN_019244-T1
LLU|FUN_019245-T1
LLU|FUN_019246-T1NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED
LLU|FUN_019247-T1TRIOKINASE/FMN CYCLASE
LLU|FUN_019248-T1UBX DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_019249-T1UBX DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_019250-T140S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI
LLU|FUN_019251-T1
LLU|FUN_019252-T1CADHERIN-23
LLU|FUN_019253-T1
LLU|FUN_019254-T1TRANSMEMBRANE PROTEIN 151 HOMOLOG
LLU|FUN_019255-T1YNEIN REGULATORY COMPLEX SUBUNIT 5
LLU|FUN_019256-T1YNEIN REGULATORY COMPLEX SUBUNIT 5
LLU|FUN_019257-T1
LLU|FUN_019258-T1MIS18-BINDING PROTEIN 1
LLU|FUN_019259-T1LACTOYLGLUTATHIONE LYASE GLYOXALASE I
LLU|FUN_019260-T1UNCHARACTERIZED
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