About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019413-T1
LLU|FUN_019414-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
LLU|FUN_019415-T1DFG10 PROTEIN
LLU|FUN_019416-T1
LLU|FUN_019417-T1
LLU|FUN_019418-T1
LLU|FUN_019419-T1
LLU|FUN_019420-T1CRUMBS FAMILY MEMBER
LLU|FUN_019421-T1
LLU|FUN_019422-T1
LLU|FUN_019423-T1
LLU|FUN_019424-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_019425-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_019426-T1S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN
LLU|FUN_019427-T1
LLU|FUN_019428-T1
LLU|FUN_019429-T1
LLU|FUN_019430-T1
LLU|FUN_019431-T1
LLU|FUN_019432-T1MTG8 ETO EIGHT TWENTY ONE PROTEIN
LLU|FUN_019433-T1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT
LLU|FUN_019434-T1N6-ADENOSINE-METHYLTRANSFERASE
LLU|FUN_019435-T1UPF0545 PROTEIN C22ORF39
LLU|FUN_019436-T1AAA DOMAIN-CONTAINING
LLU|FUN_019437-T1PEFLIN
LLU|FUN_019438-T1PEFLIN
LLU|FUN_019439-T1
LLU|FUN_019440-T1
LLU|FUN_019441-T1
LLU|FUN_019442-T1
LLU|FUN_019443-T1
LLU|FUN_019444-T1
LLU|FUN_019445-T1
LLU|FUN_019446-T1MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED
LLU|FUN_019447-T1
LLU|FUN_019448-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_019449-T1
LLU|FUN_019450-T1
LLU|FUN_019451-T1
LLU|FUN_019452-T1FORKHEAD BOX PROTEIN J1
LLU|FUN_019453-T1WW DOMAIN-BINDING PROTEIN 11
LLU|FUN_019454-T1EXOCYST COMPLEX PROTEIN EXO70
LLU|FUN_019455-T1
LLU|FUN_019456-T1POLYCOMB GROUP PROTEIN PC
LLU|FUN_019457-T1
LLU|FUN_019458-T1
LLU|FUN_019459-T1-
LLU|FUN_019460-T1EIF4G DOMAIN PROTEIN
LLU|FUN_019461-T1
LLU|FUN_019462-T1UNCHARACTERIZED
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