About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_019613-T1INHIBITOR OF APOPTOSIS
LLU|FUN_019614-T1INHIBITOR OF APOPTOSIS
LLU|FUN_019615-T1INHIBITOR OF APOPTOSIS
LLU|FUN_019616-T1
LLU|FUN_019617-T1
LLU|FUN_019618-T1INHIBITOR OF APOPTOSIS
LLU|FUN_019619-T1
LLU|FUN_019620-T1CYTOCHROME P450 508A4-RELATED
LLU|FUN_019621-T1
LLU|FUN_019622-T1
LLU|FUN_019623-T1OS10G0105400 PROTEIN
LLU|FUN_019624-T1OS10G0105400 PROTEIN
LLU|FUN_019625-T1
LLU|FUN_019626-T1ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_019627-T1
LLU|FUN_019628-T1
LLU|FUN_019629-T1
LLU|FUN_019630-T1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_019631-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13
LLU|FUN_019632-T1ANTIGEN MLAA-22-RELATED
LLU|FUN_019633-T1ANTIGEN MLAA-22-RELATED
LLU|FUN_019634-T1
LLU|FUN_019635-T1
LLU|FUN_019636-T1
LLU|FUN_019637-T1
LLU|FUN_019638-T1NUCLEAR HORMONE RECEPTOR
LLU|FUN_019639-T1GLYCOSYLTRANSFERASE
LLU|FUN_019640-T1PROTEIN NEDD1
LLU|FUN_019641-T1
LLU|FUN_019642-T1
LLU|FUN_019643-T1METHYL-CPG-BINDING PROTEIN
LLU|FUN_019644-T1
LLU|FUN_019645-T1
LLU|FUN_019646-T1PROTEIN, PUTATIVE, EXPRESSED-RELATED
LLU|FUN_019647-T1
LLU|FUN_019648-T1
LLU|FUN_019649-T1ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
LLU|FUN_019650-T1ZINC FINGER PROTEIN
LLU|FUN_019651-T1SAP30
LLU|FUN_019652-T1HIGH MOBILITY GROUP PROTEIN DSP1
LLU|FUN_019653-T1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
LLU|FUN_019654-T1EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
LLU|FUN_019655-T1CYCLINS
LLU|FUN_019656-T1EPIMERASE-RELATED
LLU|FUN_019657-T1BASIGIN RELATED
LLU|FUN_019658-T1
LLU|FUN_019659-T1
LLU|FUN_019660-T1
LLU|FUN_019661-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_019662-T1
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