About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020170-T1
LLU|FUN_020171-T1
LLU|FUN_020172-T1
LLU|FUN_020173-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_020174-T1SERINE/THREONINE-RICH PROTEIN ADG2-RELATED
LLU|FUN_020175-T1CARBOXYLESTERASE
LLU|FUN_020176-T1
LLU|FUN_020177-T1
LLU|FUN_020178-T1
LLU|FUN_020180-T1LIPASE
LLU|FUN_020181-T1DNA POLYMERASE I
LLU|FUN_020182-T1UPF0041 BRAIN PROTEIN 44-RELATED
LLU|FUN_020183-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 13B
LLU|FUN_020184-T1
LLU|FUN_020185-T1SETA BINDING PROTEIN 1
LLU|FUN_020186-T1ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1
LLU|FUN_020187-T1TRANSALDOLASE
LLU|FUN_020188-T1SI:CH211-262H13.3-RELATED-RELATED
LLU|FUN_020189-T1
LLU|FUN_020190-T1OS10G0105400 PROTEIN
LLU|FUN_020191-T1OS10G0105400 PROTEIN
LLU|FUN_020192-T1LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
LLU|FUN_020193-T1AQUAPORIN OR AQUAGLYCEROPORIN RELATED
LLU|FUN_020194-T1
LLU|FUN_020195-T1NARDILYSIN
LLU|FUN_020196-T1ZGC:174356
LLU|FUN_020197-T1
LLU|FUN_020198-T1
LLU|FUN_020199-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_020200-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_020201-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_020202-T1
LLU|FUN_020203-T1GLYCOSYLTRANSFERASE STELLO1-RELATED
LLU|FUN_020204-T1IG-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_020205-T1
LLU|FUN_020206-T1
LLU|FUN_020207-T1GRANULIN
LLU|FUN_020208-T1LY6/PLAUR DOMAIN-CONTAINING PROTEIN 6
LLU|FUN_020209-T1TRNA (GUANINE-9-) METHYLTRANSFERASE
LLU|FUN_020210-T1
LLU|FUN_020211-T1-
LLU|FUN_020212-T1
LLU|FUN_020213-T1-
LLU|FUN_020214-T1EG:EG0003.4 PROTEIN-RELATED
LLU|FUN_020215-T1
LLU|FUN_020216-T1ZINC FINGER PROTEIN
LLU|FUN_020217-T1
LLU|FUN_020218-T1
LLU|FUN_020219-T1
LLU|FUN_020220-T1IP01015P-RELATED
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