About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020271-T1RGD1565685 PROTEIN
LLU|FUN_020272-T1
LLU|FUN_020273-T1
LLU|FUN_020274-T1
LLU|FUN_020275-T1DYNEIN INTERMEDIATE CHAIN
LLU|FUN_020276-T1
LLU|FUN_020277-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_020278-T1
LLU|FUN_020279-T1
LLU|FUN_020280-T1
LLU|FUN_020281-T1
LLU|FUN_020282-T1
LLU|FUN_020283-T1
LLU|FUN_020284-T1
LLU|FUN_020285-T1TRANSMEMBRANE PROTEASE SERINE
LLU|FUN_020286-T1ALLANTOINASE
LLU|FUN_020287-T1CAT EYE SYNDROME CRITICAL REGION PROTEIN 6
LLU|FUN_020288-T1CAT EYE SYNDROME CRITICAL REGION PROTEIN 6
LLU|FUN_020289-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
LLU|FUN_020290-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_020291-T1TUBULIN
LLU|FUN_020292-T1ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED
LLU|FUN_020293-T1VANG-LIKE PROTEIN
LLU|FUN_020294-T1
LLU|FUN_020295-T1RPA-RELATED PROTEIN RADX
LLU|FUN_020296-T1ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL
LLU|FUN_020297-T1ETS
LLU|FUN_020298-T1PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED
LLU|FUN_020299-T1
LLU|FUN_020300-T1ZINC FINGER PROTEIN ZPR1
LLU|FUN_020301-T1
LLU|FUN_020302-T1MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40
LLU|FUN_020303-T1
LLU|FUN_020304-T1
LLU|FUN_020305-T1ETS
LLU|FUN_020306-T1
LLU|FUN_020307-T1ETS
LLU|FUN_020308-T1
LLU|FUN_020309-T1
LLU|FUN_020310-T1
LLU|FUN_020311-T1
LLU|FUN_020312-T1
LLU|FUN_020313-T1
LLU|FUN_020314-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_020315-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_020316-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_020317-T1HEAT SHOCK PROTEIN HSP-12.2-RELATED
LLU|FUN_020318-T1OUT AT FIRST
LLU|FUN_020319-T1
LLU|FUN_020320-T1CHYMOTRYPSIN-RELATED
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