About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020423-T1
LLU|FUN_020424-T1
LLU|FUN_020425-T1
LLU|FUN_020426-T1ANKYRIN REPEAT AND SOCS BOX PROTEIN 17
LLU|FUN_020427-T1
LLU|FUN_020428-T1UNCHARACTERIZED
LLU|FUN_020429-T1
LLU|FUN_020430-T1ASPARTYL/LYSYL-TRNA SYNTHETASE
LLU|FUN_020431-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_020432-T1GALACTOSE-3-O-SULFOTRANSFERASE
LLU|FUN_020433-T1ASPARTYL/LYSYL-TRNA SYNTHETASE
LLU|FUN_020434-T1PROTEIN DR1
LLU|FUN_020435-T1
LLU|FUN_020436-T1LUNG SEVEN TRANSMEMBRANE RECEPTOR
LLU|FUN_020437-T1
LLU|FUN_020438-T1-
LLU|FUN_020439-T1PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
LLU|FUN_020440-T1
LLU|FUN_020441-T1
LLU|FUN_020442-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_020443-T1
LLU|FUN_020444-T1
LLU|FUN_020445-T1
LLU|FUN_020446-T1
LLU|FUN_020447-T1
LLU|FUN_020448-T1LIPOXYGENASE
LLU|FUN_020449-T1
LLU|FUN_020450-T1
LLU|FUN_020451-T1
LLU|FUN_020452-T1
LLU|FUN_020453-T1IMMUNOGLOBULIN
LLU|FUN_020454-T1
LLU|FUN_020455-T1SEC14 DOMAIN AND SPECTRIN REPEAT-CONTAINING PROTEIN 1
LLU|FUN_020456-T1PHENYLALANYL-TRNA SYNTHETASE
LLU|FUN_020457-T1PCD6 INTERACTING PROTEIN-RELATED
LLU|FUN_020458-T1
LLU|FUN_020459-T1MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
LLU|FUN_020460-T1BETA TRANSDUCIN-RELATED PROTEIN
LLU|FUN_020461-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
LLU|FUN_020462-T1
LLU|FUN_020463-T1
LLU|FUN_020464-T1
LLU|FUN_020465-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_020466-T1
LLU|FUN_020467-T1CRUMBS FAMILY MEMBER
LLU|FUN_020468-T1
LLU|FUN_020469-T1FIBRINOGEN ALPHA CHAIN
LLU|FUN_020470-T1
LLU|FUN_020471-T1
LLU|FUN_020472-T1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
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