About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020473-T1
LLU|FUN_020474-T1
LLU|FUN_020475-T1
LLU|FUN_020476-T1CCAAT/ENHANCER BINDING PROTEIN
LLU|FUN_020477-T13-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED
LLU|FUN_020478-T1
LLU|FUN_020479-T1
LLU|FUN_020480-T1ANNEXIN
LLU|FUN_020481-T1DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1
LLU|FUN_020482-T1ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
LLU|FUN_020483-T1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA
LLU|FUN_020484-T1HYDROXYSTEROID (11-BETA) DEHYDROGENASE 1-LIKE B-RELATED
LLU|FUN_020485-T1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
LLU|FUN_020486-T1
LLU|FUN_020487-T1
LLU|FUN_020488-T1PROTEIN SIDEKICK
LLU|FUN_020489-T1
LLU|FUN_020490-T1
LLU|FUN_020491-T1
LLU|FUN_020492-T1
LLU|FUN_020493-T1
LLU|FUN_020494-T1MULTI-COPPER OXIDASE
LLU|FUN_020495-T1
LLU|FUN_020496-T1
LLU|FUN_020497-T1LIN-24 (TWENTY-FOUR) LIKE
LLU|FUN_020498-T1
LLU|FUN_020499-T1LIN-24 (TWENTY-FOUR) LIKE
LLU|FUN_020500-T1LIN-24 (TWENTY-FOUR) LIKE
LLU|FUN_020501-T1LIN-24 (TWENTY-FOUR) LIKE
LLU|FUN_020502-T1LIN-24 (TWENTY-FOUR) LIKE
LLU|FUN_020503-T1
LLU|FUN_020504-T1
LLU|FUN_020505-T1
LLU|FUN_020506-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_020507-T1SCHLAFEN
LLU|FUN_020508-T1ASTEROID PROTEIN
LLU|FUN_020509-T1GUANYLYL CYCLASE
LLU|FUN_020510-T1GUANYLYL CYCLASE
LLU|FUN_020511-T1CALCIUM BINDING PROTEINS
LLU|FUN_020512-T1
LLU|FUN_020513-T1INTERFERON ALPHA-INDUCIBLE PROTEIN 27
LLU|FUN_020514-T1
LLU|FUN_020515-T1NAZO FAMILY MEMBER
LLU|FUN_020516-T1DIABETES AND OBESITY REGULATED, ISOFORM G
LLU|FUN_020517-T1DREV PROTEIN
LLU|FUN_020518-T1
LLU|FUN_020519-T1UNCHARACTERIZED
LLU|FUN_020520-T1UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
LLU|FUN_020521-T1UNCHARACTERIZED
LLU|FUN_020522-T1
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