About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020673-T1
LLU|FUN_020674-T1
LLU|FUN_020675-T1
LLU|FUN_020676-T1
LLU|FUN_020677-T1
LLU|FUN_020678-T1CHITINASE
LLU|FUN_020679-T1
LLU|FUN_020680-T1
LLU|FUN_020681-T1
LLU|FUN_020682-T1
LLU|FUN_020683-T1
LLU|FUN_020684-T1
LLU|FUN_020685-T1
LLU|FUN_020686-T1
LLU|FUN_020687-T1
LLU|FUN_020688-T1UDP-GLUCOSE 4-EPIMERASE
LLU|FUN_020689-T1
LLU|FUN_020690-T1
LLU|FUN_020691-T1CERAMIDE GLUCOSYLTRANSFERASE
LLU|FUN_020692-T1DIOXYGENASE RV0097-RELATED
LLU|FUN_020693-T1DIOXYGENASE RV0097-RELATED
LLU|FUN_020694-T1
LLU|FUN_020695-T1FAS-ASSOCIATED PROTEIN
LLU|FUN_020696-T1
LLU|FUN_020697-T1DIOXYGENASE RV0097-RELATED
LLU|FUN_020698-T1FAS-ASSOCIATED PROTEIN
LLU|FUN_020699-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
LLU|FUN_020700-T1DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
LLU|FUN_020701-T1
LLU|FUN_020702-T1DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
LLU|FUN_020703-T1
LLU|FUN_020704-T1
LLU|FUN_020705-T1N-LINKED OLIGOSACCHARIDE PROCESSING
LLU|FUN_020706-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
LLU|FUN_020707-T1ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_020708-T1CALCIUM BINDING PROTEINS
LLU|FUN_020709-T1
LLU|FUN_020710-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_020711-T1LEUCINE-RICH REPEAT, ISOFORM F-RELATED
LLU|FUN_020712-T1COLORECTAL MUTANT CANCER PROTEIN MCC PROTEIN -RELATED
LLU|FUN_020713-T1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
LLU|FUN_020714-T1COLLAGEN ALPHA
LLU|FUN_020715-T1
LLU|FUN_020716-T1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
LLU|FUN_020717-T1HILLARIN
LLU|FUN_020718-T1DEOXYCYTIDYLATE DEAMINASE-RELATED
LLU|FUN_020719-T1
LLU|FUN_020720-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_020721-T1NUCLEOPORIN P54
LLU|FUN_020722-T1-
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