About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_020723-T1
LLU|FUN_020724-T1
LLU|FUN_020725-T1POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
LLU|FUN_020726-T1
LLU|FUN_020727-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_020728-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_020729-T1
LLU|FUN_020730-T1
LLU|FUN_020731-T1
LLU|FUN_020732-T1AMINOTRANSFERASE
LLU|FUN_020733-T1
LLU|FUN_020734-T1
LLU|FUN_020736-T1PATCHED-RELATED
LLU|FUN_020737-T1
LLU|FUN_020738-T1
LLU|FUN_020739-T1DEOXYCYTIDYLATE DEAMINASE-RELATED
LLU|FUN_020740-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_020741-T1TRANSMEMBRANE PROTEIN KIAA1109
LLU|FUN_020742-T1
LLU|FUN_020743-T1STEROL ISOMERASE
LLU|FUN_020744-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_020745-T1
LLU|FUN_020746-T1CHONDROMODULIN-RELATED
LLU|FUN_020747-T1
LLU|FUN_020748-T1
LLU|FUN_020749-T1
LLU|FUN_020750-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_020751-T1MULTIFUNCTIONAL PROTEIN ADE2
LLU|FUN_020752-T1ANKYRIN REPEAT-CONTAINING
LLU|FUN_020753-T1
LLU|FUN_020754-T1
LLU|FUN_020755-T1
LLU|FUN_020756-T1
LLU|FUN_020757-T1
LLU|FUN_020758-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_020759-T1
LLU|FUN_020760-T1CALPONIN
LLU|FUN_020761-T1SLR5058 PROTEIN
LLU|FUN_020762-T1
LLU|FUN_020763-T1ADHESION G-PROTEIN COUPLED RECEPTOR
LLU|FUN_020764-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_020765-T1
LLU|FUN_020766-T1
LLU|FUN_020767-T1
LLU|FUN_020768-T1MUCIN 4-RELATED
LLU|FUN_020769-T1SERINE/THREONINE-PROTEIN KINASE LMTK1
LLU|FUN_020770-T1MUCIN 4-RELATED
LLU|FUN_020771-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_020772-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_020773-T1
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