About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014415-T1
LLU|FUN_014416-T1
LLU|FUN_014417-T1
LLU|FUN_014418-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_014419-T1TP53-REGULATED INHIBITOR OF APOPTOSIS 1
LLU|FUN_014420-T1BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89
LLU|FUN_014421-T1SUPPRESSOR OF TY 4
LLU|FUN_014422-T1SPERMATOGENESIS-ASSOCIATED PROTEIN 22
LLU|FUN_014423-T1MUCIN 4-RELATED
LLU|FUN_014424-T1
LLU|FUN_014425-T1
LLU|FUN_014426-T1
LLU|FUN_014427-T1COPROPORPHYRINIGEN III OXIDASE
LLU|FUN_014428-T1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
LLU|FUN_014429-T1
LLU|FUN_014430-T1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
LLU|FUN_014431-T1
LLU|FUN_014432-T1
LLU|FUN_014433-T1
LLU|FUN_014434-T1
LLU|FUN_014435-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
LLU|FUN_014436-T1
LLU|FUN_014437-T1
LLU|FUN_014438-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
LLU|FUN_014439-T1
LLU|FUN_014440-T1
LLU|FUN_014441-T1
LLU|FUN_014442-T1
LLU|FUN_014443-T1
LLU|FUN_014444-T1HOMEOBOX PROTEIN BARH-LIKE
LLU|FUN_014445-T1UNCHARACTERIZED
LLU|FUN_014446-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_014447-T1
LLU|FUN_014448-T1SID1 TRANSMEMBRANE FAMILY MEMEBER
LLU|FUN_014449-T1
LLU|FUN_014450-T1SID1 TRANSMEMBRANE FAMILY MEMEBER
LLU|FUN_014451-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 84
LLU|FUN_014452-T1
LLU|FUN_014453-T1
LLU|FUN_014454-T1SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B
LLU|FUN_014455-T1
LLU|FUN_014456-T1
LLU|FUN_014457-T1LUNG ADENOMA SUSCEPTIBILITY 1-RELATED
LLU|FUN_014458-T1NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED
LLU|FUN_014459-T1THIOREDOXIN-LIKE PROTEN 4A, 4B
LLU|FUN_014460-T1LD18447P
LLU|FUN_014461-T1
LLU|FUN_014462-T1
LLU|FUN_014463-T1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
LLU|FUN_014464-T1
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