About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014515-T1FRUCTOSAMINE 3 KINASE-RELATED PROTEIN
LLU|FUN_014516-T1FRUCTOSAMINE 3 KINASE-RELATED PROTEIN
LLU|FUN_014517-T1TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6 TMCO6
LLU|FUN_014518-T1GLYCOGEN PHOSPHORYLASE
LLU|FUN_014519-T1CCAAT-BINDING FACTOR-RELATED
LLU|FUN_014520-T1HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
LLU|FUN_014521-T1
LLU|FUN_014522-T1
LLU|FUN_014523-T1FIBROUS SHEATH INTERACTING PROTEIN 1
LLU|FUN_014524-T1MINA53 MYC INDUCED NUCLEAR ANTIGEN
LLU|FUN_014525-T1UNCHARACTERIZED
LLU|FUN_014526-T1DISCS LARGE
LLU|FUN_014527-T1BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR
LLU|FUN_014528-T1MITOCHONDRIAL RIBOSOMAL PROTEIN S18
LLU|FUN_014529-T130S RIBOSOMAL PROTEIN S18
LLU|FUN_014530-T1CYTOCHROME C OXIDASE ASSEMBLY FACTOR 6 HOMOLOG
LLU|FUN_014531-T1
LLU|FUN_014532-T1N-ALPHA-ACETYLTRANSFERASE 30
LLU|FUN_014533-T1WD REPEAT-CONTAINING PROTEIN 81
LLU|FUN_014534-T1
LLU|FUN_014535-T1
LLU|FUN_014536-T1
LLU|FUN_014537-T1WD REPEAT-CONTAINING PROTEIN 81
LLU|FUN_014538-T1COFILIN-RELATED
LLU|FUN_014539-T1COFILIN-RELATED
LLU|FUN_014540-T1B30.2/SPRY DOMAIN-CONTAINING PROTEIN
LLU|FUN_014541-T1B30.2/SPRY DOMAIN-CONTAINING PROTEIN
LLU|FUN_014542-T1TRANSMEMBRANE PROTEIN 179
LLU|FUN_014543-T1
LLU|FUN_014544-T1TRANSMEMBRANE PROTEIN 179
LLU|FUN_014545-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_014546-T1
LLU|FUN_014547-T1
LLU|FUN_014548-T1
LLU|FUN_014549-T1
LLU|FUN_014550-T1
LLU|FUN_014551-T1
LLU|FUN_014552-T1
LLU|FUN_014553-T1NEPHRIN
LLU|FUN_014554-T1
LLU|FUN_014555-T1
LLU|FUN_014556-T1NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE
LLU|FUN_014557-T1
LLU|FUN_014558-T1
LLU|FUN_014559-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_014560-T1
LLU|FUN_014561-T1
LLU|FUN_014562-T1UNCHARACTERIZED
LLU|FUN_014563-T1
LLU|FUN_014564-T1
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