About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014615-T1RAB11-BINDING PROTEIN RELCH
LLU|FUN_014616-T1LONG-CHAIN-FATTY-ACID--COA LIGASE
LLU|FUN_014617-T1
LLU|FUN_014618-T1
LLU|FUN_014619-T1
LLU|FUN_014620-T1
LLU|FUN_014621-T1
LLU|FUN_014622-T1
LLU|FUN_014623-T1
LLU|FUN_014624-T1
LLU|FUN_014625-T1
LLU|FUN_014626-T1
LLU|FUN_014627-T1
LLU|FUN_014628-T1
LLU|FUN_014629-T1
LLU|FUN_014630-T1
LLU|FUN_014631-T1
LLU|FUN_014632-T1
LLU|FUN_014633-T1NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1
LLU|FUN_014634-T1SPERMATHECAL PHYSIOLOGY VARIANT
LLU|FUN_014635-T1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
LLU|FUN_014636-T1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
LLU|FUN_014637-T1PROTEIN C8ORF37
LLU|FUN_014638-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 6
LLU|FUN_014639-T1ZINC FINGER PROTEIN
LLU|FUN_014640-T1
LLU|FUN_014641-T1SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
LLU|FUN_014642-T1
LLU|FUN_014643-T1CDC73 DOMAIN PROTEIN
LLU|FUN_014644-T1
LLU|FUN_014645-T1CDC73 DOMAIN PROTEIN
LLU|FUN_014646-T1UBIQUITIN-ACTIVATING ENZYME E1
LLU|FUN_014647-T1TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
LLU|FUN_014648-T1
LLU|FUN_014649-T1SAL-LIKE PROTEIN
LLU|FUN_014650-T1
LLU|FUN_014651-T1
LLU|FUN_014652-T1
LLU|FUN_014653-T1
LLU|FUN_014654-T1
LLU|FUN_014655-T1FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
LLU|FUN_014656-T1STROMAL ANTIGEN
LLU|FUN_014657-T1PA14 DOMAIN-CONTAINING PROTEIN
LLU|FUN_014658-T1RNA POLYMERASE II NUCLEAR LOCALIZATION PROTEIN SLC7A6OS-RELATED
LLU|FUN_014659-T1OXA1
LLU|FUN_014660-T1TESTOSTERONE-REGULATED PROTEIN RP2
LLU|FUN_014661-T160S RIBOSOMAL PROTEIN L14
LLU|FUN_014662-T1D-LACTATE DEHYDROGENASE
LLU|FUN_014663-T1ORIGIN RECOGNITION COMPLEX SUBUNIT 6
LLU|FUN_014664-T1OS02G0815200 PROTEIN
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