About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014565-T1
LLU|FUN_014566-T1
LLU|FUN_014567-T1DNA2/NAM7 HELICASE FAMILY
LLU|FUN_014568-T1PROTEIN CBG12054-RELATED
LLU|FUN_014569-T1BACTERIOHEMERYTHRIN
LLU|FUN_014570-T1BACTERIOHEMERYTHRIN
LLU|FUN_014571-T1
LLU|FUN_014572-T1BCAS2 PROTEIN
LLU|FUN_014573-T1
LLU|FUN_014574-T1
LLU|FUN_014575-T1FORKHEAD BOX PROTEIN
LLU|FUN_014576-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 115
LLU|FUN_014577-T1F-BOX ONLY PROTEIN 42
LLU|FUN_014578-T1GENE, 49355-RELATED
LLU|FUN_014579-T1PROTEIN EVA-1
LLU|FUN_014580-T1
LLU|FUN_014581-T1
LLU|FUN_014582-T1PROTEIN EVA-1
LLU|FUN_014583-T1CELL DEATH ACTIVATOR CIDE
LLU|FUN_014584-T1PROTEIN LZIC
LLU|FUN_014585-T1ZINC FINGER PROTEIN
LLU|FUN_014586-T1
LLU|FUN_014587-T1TARGETING PROTEIN FOR XKLP2
LLU|FUN_014588-T1ANAMORSIN
LLU|FUN_014589-T1FRG1 PROTEIN
LLU|FUN_014590-T1RP42 RELATED
LLU|FUN_014591-T1
LLU|FUN_014592-T1
LLU|FUN_014593-T1
LLU|FUN_014594-T1CASEIN KINASE-RELATED
LLU|FUN_014595-T1
LLU|FUN_014596-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7
LLU|FUN_014597-T1TYROSINE-PROTEIN KINASE
LLU|FUN_014598-T1
LLU|FUN_014599-T1
LLU|FUN_014600-T1
LLU|FUN_014601-T1
LLU|FUN_014602-T1BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
LLU|FUN_014603-T1BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2
LLU|FUN_014604-T1
LLU|FUN_014605-T1BONUS, ISOFORM C-RELATED
LLU|FUN_014606-T1
LLU|FUN_014607-T1
LLU|FUN_014608-T1
LLU|FUN_014609-T1
LLU|FUN_014610-T1
LLU|FUN_014611-T1
LLU|FUN_014612-T1
LLU|FUN_014613-T1
LLU|FUN_014614-T1
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