About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014715-T1JBTS17
LLU|FUN_014716-T1JBTS17
LLU|FUN_014717-T1
LLU|FUN_014718-T1
LLU|FUN_014719-T1
LLU|FUN_014720-T1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
LLU|FUN_014721-T1ADIPOR/PROGESTIN RECEPTOR-RELATED
LLU|FUN_014722-T1FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
LLU|FUN_014723-T1CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL
LLU|FUN_014724-T1S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE
LLU|FUN_014725-T1CALCYPHOSIN
LLU|FUN_014726-T1
LLU|FUN_014727-T1
LLU|FUN_014728-T1FERROCHELATASE
LLU|FUN_014729-T1DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
LLU|FUN_014730-T1
LLU|FUN_014731-T1
LLU|FUN_014732-T1
LLU|FUN_014733-T1GLYCOSYLTRANSFERASE
LLU|FUN_014734-T1
LLU|FUN_014735-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
LLU|FUN_014736-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
LLU|FUN_014737-T1
LLU|FUN_014738-T1
LLU|FUN_014739-T1
LLU|FUN_014740-T1
LLU|FUN_014741-T1
LLU|FUN_014742-T1
LLU|FUN_014743-T1
LLU|FUN_014744-T1
LLU|FUN_014745-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_014746-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_014747-T1FMRFAMIDE RECEPTOR-RELATED
LLU|FUN_014748-T1
LLU|FUN_014749-T1
LLU|FUN_014750-T1
LLU|FUN_014751-T1
LLU|FUN_014752-T1
LLU|FUN_014753-T1
LLU|FUN_014754-T1
LLU|FUN_014755-T1
LLU|FUN_014756-T1
LLU|FUN_014757-T1
LLU|FUN_014758-T1PLASMINOGEN-RELATED
LLU|FUN_014759-T1LEUCINE RICH REPEAT FAMILY PROTEIN
LLU|FUN_014760-T1
LLU|FUN_014761-T1
LLU|FUN_014762-T1-
LLU|FUN_014763-T1
LLU|FUN_014764-T1
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