About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014365-T1
LLU|FUN_014366-T1
LLU|FUN_014367-T1UNCHARACTERIZED
LLU|FUN_014368-T1
LLU|FUN_014369-T1
LLU|FUN_014370-T1
LLU|FUN_014371-T1
LLU|FUN_014372-T1
LLU|FUN_014373-T1
LLU|FUN_014374-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_014375-T1
LLU|FUN_014376-T1
LLU|FUN_014377-T1
LLU|FUN_014378-T1
LLU|FUN_014379-T1
LLU|FUN_014380-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
LLU|FUN_014381-T1URIDINE KINASE
LLU|FUN_014382-T1
LLU|FUN_014383-T1SQUALENE MONOOXYGENASE
LLU|FUN_014384-T1NGD5/OSM-6/IFT52
LLU|FUN_014385-T1PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE
LLU|FUN_014386-T1APONTIC
LLU|FUN_014387-T1POLYCOMB GROUP PROTEIN
LLU|FUN_014388-T1
LLU|FUN_014389-T1
LLU|FUN_014390-T1
LLU|FUN_014391-T1
LLU|FUN_014392-T1
LLU|FUN_014393-T1
LLU|FUN_014394-T1
LLU|FUN_014395-T1
LLU|FUN_014396-T1RHO-GTPASE-ACTIVATING PROTEIN LRG1
LLU|FUN_014397-T1UNCHARACTERIZED
LLU|FUN_014398-T1LP07818P1
LLU|FUN_014399-T1
LLU|FUN_014400-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_014401-T1
LLU|FUN_014402-T1
LLU|FUN_014403-T1THISBE
LLU|FUN_014404-T1CARDIOACCELERATORY PEPTIDE RECEPTOR-RELATED
LLU|FUN_014405-T1FOCADHESIN FAMILY MEMBER
LLU|FUN_014406-T1O-ACYLTRANSFERASE
LLU|FUN_014407-T1TMEM26 PROTEIN
LLU|FUN_014408-T1
LLU|FUN_014409-T1
LLU|FUN_014410-T1
LLU|FUN_014411-T1TMEM26 PROTEIN
LLU|FUN_014412-T1
LLU|FUN_014413-T1THIOESTERASE
LLU|FUN_014414-T1THIOESTERASE
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