About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014109-T1CALCIUM-DEPENDENT SECRETION ACTIVATOR
LLU|FUN_014110-T1UPSET, ISOFORM A
LLU|FUN_014111-T1
LLU|FUN_014112-T1CYTOCHROME P450 FAMILY 7
LLU|FUN_014113-T1
LLU|FUN_014114-T1CYTOCHROME P450 FAMILY 7
LLU|FUN_014115-T1
LLU|FUN_014116-T1
LLU|FUN_014117-T1
LLU|FUN_014118-T1
LLU|FUN_014119-T1REPETIN
LLU|FUN_014120-T1BCR-ASSOCIATED PROTEIN, BAP
LLU|FUN_014121-T1UNCHARACTERIZED
LLU|FUN_014122-T1
LLU|FUN_014123-T1FANCONI ANEMIA GROUP D2 PROTEIN
LLU|FUN_014124-T1THUMP DOMAIN-CONTAINING
LLU|FUN_014125-T1RIBITOL-5-PHOSPHATE XYLOSYLTRANSFERASE 1
LLU|FUN_014126-T1PHOSDUCIN-LIKE PROTEIN
LLU|FUN_014127-T1TRANSMEMBRANE PROTEIN 246
LLU|FUN_014128-T1
LLU|FUN_014129-T1
LLU|FUN_014130-T1
LLU|FUN_014131-T1
LLU|FUN_014132-T1
LLU|FUN_014133-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_014134-T1
LLU|FUN_014135-T1
LLU|FUN_014136-T1
LLU|FUN_014137-T1
LLU|FUN_014138-T1DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
LLU|FUN_014139-T1
LLU|FUN_014140-T1ALANINE RACEMASE
LLU|FUN_014141-T1PEPTIDOGLYCAN RECOGNITION PROTEIN
LLU|FUN_014142-T1
LLU|FUN_014143-T1
LLU|FUN_014144-T1
LLU|FUN_014145-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_014146-T1
LLU|FUN_014147-T1PROTEIN CBG04600
LLU|FUN_014148-T1
LLU|FUN_014149-T1PROTEIN CBG04600
LLU|FUN_014150-T1
LLU|FUN_014151-T1PROTEIN CBG04600
LLU|FUN_014152-T1
LLU|FUN_014153-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED
LLU|FUN_014154-T1INTELECTIN
LLU|FUN_014155-T1
LLU|FUN_014156-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_014157-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_014158-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
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