About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_013851-T1
LLU|FUN_013852-T1
LLU|FUN_013853-T1
LLU|FUN_013854-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_013855-T1
LLU|FUN_013856-T1
LLU|FUN_013857-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_013858-T1
LLU|FUN_013859-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_013860-T1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
LLU|FUN_013861-T1MITOGEN-ACTIVATED PROTEIN KINASE
LLU|FUN_013862-T1FGF RECEPTOR ACTIVATING PROTEIN 1
LLU|FUN_013863-T1LUPUS LA PROTEIN-RELATED
LLU|FUN_013864-T1
LLU|FUN_013865-T1ARGINYL-TRNA SYNTHETASE
LLU|FUN_013866-T1
LLU|FUN_013867-T1UNCHARACTERIZED
LLU|FUN_013868-T1
LLU|FUN_013869-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_013870-T1ARGINYL-TRNA SYNTHETASE
LLU|FUN_013871-T1B-LYMPHOCYTE ANTIGEN-RELATED
LLU|FUN_013872-T1KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED
LLU|FUN_013873-T1
LLU|FUN_013874-T1
LLU|FUN_013875-T1
LLU|FUN_013876-T1BONUS, ISOFORM C-RELATED
LLU|FUN_013877-T1BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED
LLU|FUN_013878-T1PROTEIN ABHD18
LLU|FUN_013879-T1PROTEIN ABHD18
LLU|FUN_013880-T1NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1
LLU|FUN_013881-T1
LLU|FUN_013882-T1
LLU|FUN_013883-T1MYOTUBULARIN-RELATED
LLU|FUN_013884-T1
LLU|FUN_013885-T1ANKYRIN REPEAT FAMILY PROTEIN
LLU|FUN_013886-T1
LLU|FUN_013887-T1SORTING NEXIN
LLU|FUN_013888-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_013889-T1
LLU|FUN_013891-T1
LLU|FUN_013892-T1SOLUTE CARRIER FAMILY 35
LLU|FUN_013893-T1
LLU|FUN_013894-T1LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN
LLU|FUN_013895-T1
LLU|FUN_013896-T1CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN
LLU|FUN_013897-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_013898-T1
LLU|FUN_013899-T1
LLU|FUN_013900-T1RAN GTPASE-ACTIVATING PROTEIN 1
LLU|FUN_013901-T1
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