About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_013601-T1
LLU|FUN_013602-T1
LLU|FUN_013603-T1APOPTOSIS REGULATORY PROTEIN SIVA
LLU|FUN_013604-T1CODANIN-1
LLU|FUN_013605-T1
LLU|FUN_013606-T1
LLU|FUN_013607-T1MRNA-CAPPING ENZYME
LLU|FUN_013608-T1
LLU|FUN_013609-T1PARAOXONASE
LLU|FUN_013610-T1
LLU|FUN_013611-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_013612-T1AMMONIUM TRANSPORTER
LLU|FUN_013613-T1AMMONIUM TRANSPORTER
LLU|FUN_013614-T1
LLU|FUN_013615-T1
LLU|FUN_013616-T1
LLU|FUN_013617-T1ORGANIC ANION TRANSPORTER
LLU|FUN_013618-T1ORGANIC ANION TRANSPORTER
LLU|FUN_013619-T1OS05G0310600 PROTEIN
LLU|FUN_013620-T1
LLU|FUN_013621-T1
LLU|FUN_013622-T1
LLU|FUN_013623-T1
LLU|FUN_013624-T1
LLU|FUN_013625-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_013626-T1
LLU|FUN_013627-T1
LLU|FUN_013628-T1CYSTATHIONINE BETA-SYNTHASE
LLU|FUN_013629-T1RGD1565685 PROTEIN
LLU|FUN_013630-T1
LLU|FUN_013631-T1
LLU|FUN_013632-T1
LLU|FUN_013633-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
LLU|FUN_013634-T1
LLU|FUN_013635-T1
LLU|FUN_013636-T1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
LLU|FUN_013637-T1
LLU|FUN_013638-T1
LLU|FUN_013639-T1CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3
LLU|FUN_013640-T1
LLU|FUN_013641-T1MATRIX PROTEIN, PUTATIVE-RELATED
LLU|FUN_013642-T1
LLU|FUN_013643-T1MATRIX PROTEIN, PUTATIVE-RELATED
LLU|FUN_013644-T1
LLU|FUN_013645-T1
LLU|FUN_013646-T1MATRIX PROTEIN, PUTATIVE-RELATED
LLU|FUN_013647-T1
LLU|FUN_013648-T1
LLU|FUN_013649-T1
LLU|FUN_013650-T1UBIQUITIN-CONJUGATING ENZYME E2
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