About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_013701-T1-
LLU|FUN_013702-T1
LLU|FUN_013703-T1DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
LLU|FUN_013704-T1
LLU|FUN_013705-T1COLLAGEN ALPHA
LLU|FUN_013706-T1DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
LLU|FUN_013707-T1DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
LLU|FUN_013708-T1
LLU|FUN_013709-T1
LLU|FUN_013710-T1NUCLEAR PORE GLYCOPROTEIN P62-RELATED
LLU|FUN_013711-T1ADAPTIN, ALPHA/GAMMA/EPSILON
LLU|FUN_013712-T1
LLU|FUN_013713-T1AKT1 SUBSTRATE 1 PROTEIN
LLU|FUN_013714-T1NUCLEAR HORMONE RECEPTOR
LLU|FUN_013715-T1
LLU|FUN_013716-T1OPSIN
LLU|FUN_013717-T1
LLU|FUN_013718-T1
LLU|FUN_013719-T1
LLU|FUN_013720-T1CELL DIVISION PROTEIN KINASE
LLU|FUN_013721-T1
LLU|FUN_013722-T1
LLU|FUN_013723-T1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
LLU|FUN_013724-T1
LLU|FUN_013725-T1
LLU|FUN_013726-T1
LLU|FUN_013727-T1
LLU|FUN_013728-T1-
LLU|FUN_013729-T1
LLU|FUN_013730-T1PROTEASE M1 ZINC METALLOPROTEASE
LLU|FUN_013731-T1
LLU|FUN_013732-T1
LLU|FUN_013733-T1NEURABIN
LLU|FUN_013734-T1
LLU|FUN_013735-T1UNCHARACTERIZED
LLU|FUN_013736-T1UNCHARACTERIZED
LLU|FUN_013737-T1
LLU|FUN_013738-T1NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
LLU|FUN_013739-T1RESISTANCE TO INHIBITORS OF CHOLINESTERASE PROTEIN 3 RIC3
LLU|FUN_013740-T1UNCHARACTERIZED
LLU|FUN_013741-T1
LLU|FUN_013742-T1
LLU|FUN_013743-T1UNCHARACTERIZED
LLU|FUN_013744-T1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
LLU|FUN_013745-T1
LLU|FUN_013746-T1
LLU|FUN_013747-T1
LLU|FUN_013748-T1
LLU|FUN_013749-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
LLU|FUN_013750-T1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
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