About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_013651-T1RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
LLU|FUN_013652-T1
LLU|FUN_013653-T1L-ASPARAGINASE
LLU|FUN_013654-T1
LLU|FUN_013655-T1
LLU|FUN_013656-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
LLU|FUN_013657-T1NUCLEOPORIN
LLU|FUN_013658-T1
LLU|FUN_013659-T1CBP/P300-RELATED
LLU|FUN_013660-T1GLYCOSYL TRANSFERASE
LLU|FUN_013661-T1MITOCHONDRIAL RIBOSOMAL PROTEIN L30
LLU|FUN_013662-T1
LLU|FUN_013663-T1
LLU|FUN_013664-T1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_013665-T1RGD1565685 PROTEIN
LLU|FUN_013666-T1
LLU|FUN_013667-T1
LLU|FUN_013668-T1
LLU|FUN_013669-T1TRANSMEMBRANE PROTEIN 237
LLU|FUN_013670-T1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
LLU|FUN_013671-T1
LLU|FUN_013672-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_013673-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_013674-T1
LLU|FUN_013675-T1
LLU|FUN_013676-T1
LLU|FUN_013677-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_013678-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_013679-T1
LLU|FUN_013680-T1
LLU|FUN_013681-T1CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5
LLU|FUN_013682-T1
LLU|FUN_013683-T1
LLU|FUN_013684-T1
LLU|FUN_013685-T1N-ACETYLGLUTAMATE SYNTHASE
LLU|FUN_013686-T1PROTEIN CASC3
LLU|FUN_013687-T1CYTOKINE RECEPTOR
LLU|FUN_013688-T1CYTOKINE RECEPTOR
LLU|FUN_013689-T1
LLU|FUN_013690-T1
LLU|FUN_013691-T1
LLU|FUN_013692-T1
LLU|FUN_013693-T1
LLU|FUN_013694-T1
LLU|FUN_013695-T1
LLU|FUN_013696-T1
LLU|FUN_013697-T1
LLU|FUN_013698-T1
LLU|FUN_013699-T1
LLU|FUN_013700-T1
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