About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_013952-T1
LLU|FUN_013953-T1
LLU|FUN_013954-T1MEIOSIS 1 ARREST PROTEIN
LLU|FUN_013955-T1
LLU|FUN_013956-T1RGD1565685 PROTEIN
LLU|FUN_013957-T1
LLU|FUN_013958-T1
LLU|FUN_013959-T1
LLU|FUN_013960-T1
LLU|FUN_013961-T1
LLU|FUN_013962-T1FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
LLU|FUN_013963-T1CALPAIN
LLU|FUN_013964-T1
LLU|FUN_013965-T1
LLU|FUN_013967-T1CYTOKINE RECEPTOR
LLU|FUN_013968-T1CRUMBS FAMILY MEMBER
LLU|FUN_013969-T1
LLU|FUN_013970-T1CRUMBS FAMILY MEMBER
LLU|FUN_013971-T1
LLU|FUN_013972-T1
LLU|FUN_013973-T1
LLU|FUN_013974-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_013975-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_013976-T1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
LLU|FUN_013977-T1
LLU|FUN_013978-T1
LLU|FUN_013979-T1
LLU|FUN_013980-T1UNCHARACTERIZED
LLU|FUN_013981-T1GLYCOGEN DEBRANCHING ENZYME
LLU|FUN_013982-T1
LLU|FUN_013983-T1
LLU|FUN_013984-T1
LLU|FUN_013985-T1
LLU|FUN_013986-T1
LLU|FUN_013987-T1ANKYRIN REPEAT CONTAINING
LLU|FUN_013988-T1
LLU|FUN_013989-T1
LLU|FUN_013990-T1
LLU|FUN_013991-T1
LLU|FUN_013992-T1
LLU|FUN_013993-T1
LLU|FUN_013994-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_013995-T1
LLU|FUN_013996-T1UNCHARACTERIZED
LLU|FUN_013997-T1ATILLA, ISOFORM B-RELATED-RELATED
LLU|FUN_013998-T1
LLU|FUN_013999-T1PROTEIN SIDEKICK
LLU|FUN_014000-T1PIERCE HOMOLOG
LLU|FUN_014001-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_014002-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
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