About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

<< First 272 273 274 275 276 277 278 279 280 281 Forward> Last>>        807 pages in total

Gene IDDescription
LLU|FUN_014003-T1
LLU|FUN_014004-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_014005-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_014006-T1
LLU|FUN_014007-T1
LLU|FUN_014008-T1
LLU|FUN_014009-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_014010-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_014011-T1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
LLU|FUN_014012-T1AMIDOPHOSPHORIBOSYLTRANSFERASE
LLU|FUN_014013-T1ZGC:153352
LLU|FUN_014014-T1
LLU|FUN_014015-T1PLAT DOMAIN-CONTAINING PROTEIN
LLU|FUN_014016-T1
LLU|FUN_014017-T1
LLU|FUN_014018-T1EPHRIN TYPE-B RECEPTOR
LLU|FUN_014019-T1
LLU|FUN_014020-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_014021-T1POLYCYSTIN FAMILY MEMBER
LLU|FUN_014022-T1POLYCYSTIN-1
LLU|FUN_014023-T1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
LLU|FUN_014024-T1BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
LLU|FUN_014025-T1
LLU|FUN_014026-T1
LLU|FUN_014027-T1
LLU|FUN_014028-T1
LLU|FUN_014029-T1
LLU|FUN_014030-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_014037-T1HOMEOBOX PROTEIN HHEX
LLU|FUN_014038-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
LLU|FUN_014039-T1
LLU|FUN_014040-T1
LLU|FUN_014041-T1
LLU|FUN_014042-T1BLR2807 PROTEIN
LLU|FUN_014043-T11-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED
LLU|FUN_014044-T1
LLU|FUN_014045-T1
LLU|FUN_014046-T1
LLU|FUN_014047-T1
LLU|FUN_014048-T1
LLU|FUN_014049-T1
LLU|FUN_014050-T1METALLOPROTEASE M41 FTSH
LLU|FUN_014051-T1CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE
LLU|FUN_014052-T1GLUTAMATE 5-KINASE
LLU|FUN_014053-T1MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
LLU|FUN_014054-T1DUAL SPECIFICITY PROTEIN KINASE
LLU|FUN_014055-T1MUCIN-17
LLU|FUN_014056-T1DUAL SPECIFICITY PROTEIN KINASE
LLU|FUN_014057-T1
LLU|FUN_014058-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
TOP