About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014159-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_014160-T1
LLU|FUN_014161-T1
LLU|FUN_014162-T1B-CELL LYMPHOMA/LEUKEMIA 10
LLU|FUN_014163-T1PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER
LLU|FUN_014164-T1PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER
LLU|FUN_014165-T1
LLU|FUN_014166-T1
LLU|FUN_014167-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_014168-T1DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
LLU|FUN_014169-T1
LLU|FUN_014170-T1
LLU|FUN_014171-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
LLU|FUN_014172-T1ZINC FINGER PROTEIN
LLU|FUN_014173-T1
LLU|FUN_014174-T1ZNF44 PROTEIN
LLU|FUN_014175-T1
LLU|FUN_014176-T1ZINC FINGER PROTEIN
LLU|FUN_014177-T1E3 UBIQUITIN-PROTEIN LIGASE UBR5
LLU|FUN_014178-T1
LLU|FUN_014179-T1E3 UBIQUITIN-PROTEIN LIGASE UBR5
LLU|FUN_014180-T1NEUROBLAST DIFFERENTIATION-ASSOCIATED PROTEIN AHNAK-LIKE PROTEIN
LLU|FUN_014181-T1E3 UBIQUITIN-PROTEIN LIGASE UBR5
LLU|FUN_014182-T1-
LLU|FUN_014183-T1YIPPEE DOMAIN-CONTAINING PROTEIN
LLU|FUN_014184-T1
LLU|FUN_014185-T1
LLU|FUN_014186-T1
LLU|FUN_014187-T1
LLU|FUN_014188-T1DUF614 FAMILY PROTEIN-RELATED
LLU|FUN_014189-T1
LLU|FUN_014190-T1ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_014191-T1
LLU|FUN_014192-T1
LLU|FUN_014193-T1
LLU|FUN_014194-T1SRCR DOMAIN-CONTAINING PROTEIN
LLU|FUN_014195-T1
LLU|FUN_014196-T1
LLU|FUN_014197-T1
LLU|FUN_014198-T1
LLU|FUN_014199-T1
LLU|FUN_014200-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_014201-T1
LLU|FUN_014202-T1
LLU|FUN_014203-T1
LLU|FUN_014204-T1
LLU|FUN_014205-T1
LLU|FUN_014206-T1
LLU|FUN_014207-T1
LLU|FUN_014208-T1
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