About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014209-T1ALPHA-MANNOSIDASE
LLU|FUN_014210-T1
LLU|FUN_014211-T1ALPHA-MANNOSIDASE
LLU|FUN_014212-T1CYTOCHROME P450 FAMILY 3
LLU|FUN_014213-T1
LLU|FUN_014214-T1
LLU|FUN_014215-T1
LLU|FUN_014216-T1TRANSMEMBRANE PROTEIN
LLU|FUN_014217-T1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
LLU|FUN_014218-T1
LLU|FUN_014219-T1
LLU|FUN_014220-T1
LLU|FUN_014221-T1PALMITOYLTRANSFERASE
LLU|FUN_014222-T1
LLU|FUN_014223-T1
LLU|FUN_014224-T1
LLU|FUN_014225-T1
LLU|FUN_014226-T1
LLU|FUN_014227-T1
LLU|FUN_014228-T1MISSHAPEN LIKE KINASE 1
LLU|FUN_014229-T1ALANYL-TRNA SYNTHETASE
LLU|FUN_014230-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
LLU|FUN_014231-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
LLU|FUN_014232-T1HEAT SHOCK PROTEIN 70KDA
LLU|FUN_014233-T1HEAT SHOCK PROTEIN 70KDA
LLU|FUN_014234-T1
LLU|FUN_014235-T1
LLU|FUN_014236-T1
LLU|FUN_014237-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
LLU|FUN_014238-T1TOLL-LIKE RECEPTOR
LLU|FUN_014239-T1TOLL-LIKE RECEPTOR
LLU|FUN_014240-T1STAR-RELATED LIPID TRANSFER PROTEIN 9
LLU|FUN_014241-T1
LLU|FUN_014242-T1PROTEIN EVA-1
LLU|FUN_014247-T1PROTEIN CBG12054-RELATED
LLU|FUN_014248-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
LLU|FUN_014249-T1TRANSMEMBRANE PROTEIN 98
LLU|FUN_014250-T1
LLU|FUN_014251-T1UNCHARACTERIZED
LLU|FUN_014252-T1
LLU|FUN_014253-T1
LLU|FUN_014254-T1BETA1,3-GALACTOSYLTRANSFERASE
LLU|FUN_014255-T1
LLU|FUN_014256-T1MALE FERTILITY FACTOR KL5
LLU|FUN_014257-T1MALE FERTILITY FACTOR KL5
LLU|FUN_014258-T1MALE FERTILITY FACTOR KL5
LLU|FUN_014259-T1MALE FERTILITY FACTOR KL5
LLU|FUN_014260-T1MALE FERTILITY FACTOR KL5
LLU|FUN_014261-T1
LLU|FUN_014262-T1MALE FERTILITY FACTOR KL5
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