About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_014313-T1
LLU|FUN_014314-T1
LLU|FUN_014315-T1
LLU|FUN_014316-T1
LLU|FUN_014317-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_014318-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_014319-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_014320-T1
LLU|FUN_014321-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_014322-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_014323-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
LLU|FUN_014324-T1
LLU|FUN_014325-T1SACSIN
LLU|FUN_014326-T1PALMITOYLTRANSFERASE ZDHHC16
LLU|FUN_014327-T1
LLU|FUN_014328-T1
LLU|FUN_014329-T1
LLU|FUN_014330-T1
LLU|FUN_014331-T1
LLU|FUN_014332-T1PHD-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_014333-T1TELOMERASE REVERSE TRANSCRIPTASE
LLU|FUN_014336-T1ACETYLTRANSFERASE
LLU|FUN_014337-T1CHITIN BINDING PERITROPHIN-A
LLU|FUN_014338-T1FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)
LLU|FUN_014339-T1TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED
LLU|FUN_014340-T1D-TYROSYL-TRNA TYR DEACYLASE
LLU|FUN_014341-T1POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED
LLU|FUN_014342-T1STRAWBERRY NOTCH-RELATED
LLU|FUN_014343-T1STRAWBERRY NOTCH-RELATED
LLU|FUN_014344-T1TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL
LLU|FUN_014345-T1
LLU|FUN_014346-T1PROPERDIN
LLU|FUN_014347-T1
LLU|FUN_014348-T1
LLU|FUN_014349-T1
LLU|FUN_014350-T1
LLU|FUN_014351-T1
LLU|FUN_014352-T1
LLU|FUN_014353-T1
LLU|FUN_014354-T1PALMITOYLTRANSFERASE
LLU|FUN_014355-T1
LLU|FUN_014356-T1HELICASE WITH DEATH DOMAIN-RELATED
LLU|FUN_014357-T1
LLU|FUN_014358-T1
LLU|FUN_014359-T1RETINOBLASTOMA-BINDING PROTEIN 5
LLU|FUN_014360-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_014361-T1
LLU|FUN_014362-T1
LLU|FUN_014363-T1
LLU|FUN_014364-T1
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