About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010669-T1
LLU|FUN_010670-T1INTIMAL THICKNESS RECEPTOR-RELATED
LLU|FUN_010671-T1CYTOCHROME C OXIDASE ASSEMBLY FACTOR 4 HOMOLOG, MITOCHONDRIAL
LLU|FUN_010672-T1
LLU|FUN_010673-T1
LLU|FUN_010674-T1INOSITOL MONOPHOSPHATASE
LLU|FUN_010675-T1ATP-DEPENDENT PROTEASE
LLU|FUN_010676-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12
LLU|FUN_010677-T1IST1 FAMILY MEMBER
LLU|FUN_010678-T1N-MYC DOWNSTREAM REGULATED
LLU|FUN_010679-T1
LLU|FUN_010680-T1MALE FERTILITY FACTOR KL5
LLU|FUN_010681-T1UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
LLU|FUN_010682-T1
LLU|FUN_010683-T1UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
LLU|FUN_010684-T1
LLU|FUN_010685-T1
LLU|FUN_010686-T1
LLU|FUN_010687-T1AGAP008005-PA
LLU|FUN_010688-T1AGAP008005-PA
LLU|FUN_010689-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_010690-T1
LLU|FUN_010691-T1
LLU|FUN_010692-T1IRE1-RELATED
LLU|FUN_010693-T1
LLU|FUN_010694-T1
LLU|FUN_010695-T1
LLU|FUN_010696-T1
LLU|FUN_010697-T1
LLU|FUN_010698-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_010699-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_010700-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_010701-T1
LLU|FUN_010702-T1
LLU|FUN_010703-T1
LLU|FUN_010704-T1
LLU|FUN_010705-T1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
LLU|FUN_010706-T1
LLU|FUN_010707-T1-
LLU|FUN_010708-T1
LLU|FUN_010709-T1GALACTOSE-3-O-SULFOTRANSFERASE
LLU|FUN_010710-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_010711-T1
LLU|FUN_010712-T1ARRESTIN DOMAIN CONTAINING PROTEIN
LLU|FUN_010713-T1MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
LLU|FUN_010714-T1BUD13 HOMOLOG
LLU|FUN_010715-T1
LLU|FUN_010716-T1DAP3-BINDING CELL DEATH ENHANCER 1
LLU|FUN_010717-T1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
LLU|FUN_010718-T1
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