About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010569-T1ZINC FINGER PROTEIN
LLU|FUN_010570-T1YTH YT521-B HOMOLOGY DOMAIN-CONTAINING
LLU|FUN_010571-T1SARCOGLYCAN
LLU|FUN_010572-T1UNCHARACTERIZED
LLU|FUN_010573-T1HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
LLU|FUN_010574-T1CYTOKINE RECEPTOR
LLU|FUN_010575-T1
LLU|FUN_010576-T1
LLU|FUN_010577-T1
LLU|FUN_010578-T1
LLU|FUN_010579-T1TESTIS-EXPRESSED PROTEIN 15
LLU|FUN_010580-T1
LLU|FUN_010581-T1RAS-RELATED PROTEIN RAB
LLU|FUN_010582-T1
LLU|FUN_010583-T1
LLU|FUN_010584-T1GH03947P
LLU|FUN_010585-T1
LLU|FUN_010586-T1
LLU|FUN_010587-T1
LLU|FUN_010588-T1SARM1
LLU|FUN_010589-T1
LLU|FUN_010590-T1STATHMIN
LLU|FUN_010591-T1TRANSMEMBRANE PROTEIN 59-LIKE PROTEIN
LLU|FUN_010592-T1
LLU|FUN_010593-T1GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1
LLU|FUN_010594-T1
LLU|FUN_010595-T1
LLU|FUN_010596-T1
LLU|FUN_010597-T1
LLU|FUN_010598-T1
LLU|FUN_010599-T1
LLU|FUN_010600-T1
LLU|FUN_010601-T1
LLU|FUN_010602-T1
LLU|FUN_010603-T1
LLU|FUN_010604-T1
LLU|FUN_010605-T1
LLU|FUN_010606-T1XANTHINE DEHYDROGENASE
LLU|FUN_010607-T1
LLU|FUN_010608-T1ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED
LLU|FUN_010609-T1
LLU|FUN_010610-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
LLU|FUN_010611-T1
LLU|FUN_010612-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
LLU|FUN_010613-T1
LLU|FUN_010614-T1
LLU|FUN_010615-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
LLU|FUN_010616-T1
LLU|FUN_010617-T1
LLU|FUN_010618-T1N-ACETYLGALACTOSAMINYLTRANSFERASE
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