About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010719-T1
LLU|FUN_010720-T1
LLU|FUN_010721-T1
LLU|FUN_010722-T1
LLU|FUN_010723-T1
LLU|FUN_010724-T1
LLU|FUN_010725-T1EXPRESSED PROTEIN
LLU|FUN_010726-T1
LLU|FUN_010727-T1ADENOMATOSIS POLYPOSIS COLI DOWN-REGULATED 1
LLU|FUN_010728-T1ADENOMATOSIS POLYPOSIS COLI DOWN-REGULATED 1
LLU|FUN_010729-T1
LLU|FUN_010730-T1SODIUM/HYDROGEN EXCHANGER
LLU|FUN_010731-T1
LLU|FUN_010732-T1
LLU|FUN_010733-T1
LLU|FUN_010734-T1
LLU|FUN_010735-T1
LLU|FUN_010736-T1RYANODINE RECEPTOR AND IP3 RECEPTOR
LLU|FUN_010737-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_010738-T1
LLU|FUN_010739-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
LLU|FUN_010740-T1ATP-BINDING CASSETTE SUB-FAMILY B
LLU|FUN_010741-T1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
LLU|FUN_010742-T1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
LLU|FUN_010743-T1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
LLU|FUN_010744-T1-
LLU|FUN_010745-T1
LLU|FUN_010746-T1
LLU|FUN_010747-T1
LLU|FUN_010748-T1
LLU|FUN_010749-T1
LLU|FUN_010750-T1UNCHARACTERIZED
LLU|FUN_010751-T1PROTEIN LIN1
LLU|FUN_010752-T1CLATHRIN HEAVY CHAIN RELATED
LLU|FUN_010753-T1
LLU|FUN_010754-T1
LLU|FUN_010755-T1
LLU|FUN_010756-T1CHITIN BINDING PERITROPHIN-A
LLU|FUN_010757-T1
LLU|FUN_010758-T1
LLU|FUN_010759-T1MYOTONIC DYSTROPHY S/T KINASE-RELATED
LLU|FUN_010760-T1MYOTONIC DYSTROPHY S/T KINASE-RELATED
LLU|FUN_010761-T1BICD FAMILY-LIKE CARGO ADAPTER
LLU|FUN_010762-T1PROTEIN LIAT1
LLU|FUN_010763-T1
LLU|FUN_010764-T1EXONUCLEASE V
LLU|FUN_010765-T1PEROXISOMAL SARCOSINE OXIDASE
LLU|FUN_010766-T1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
LLU|FUN_010767-T1
LLU|FUN_010768-T1
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