About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010822-T1
LLU|FUN_010823-T1GENE, 32742-RELATED-RELATED
LLU|FUN_010824-T1GENE 9195-RELATED-RELATED
LLU|FUN_010825-T1LON PROTEASE
LLU|FUN_010826-T1
LLU|FUN_010827-T1SYNAPTOTAGMIN
LLU|FUN_010828-T1
LLU|FUN_010829-T1SYNAPTOTAGMIN
LLU|FUN_010830-T1
LLU|FUN_010831-T1UNCHARACTERIZED
LLU|FUN_010832-T1-
LLU|FUN_010833-T1MITOCHONDRIAL DISTRIBUTION REGULATOR MISATO
LLU|FUN_010834-T1LAMIN DM0-RELATED
LLU|FUN_010835-T1
LLU|FUN_010836-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
LLU|FUN_010837-T1
LLU|FUN_010838-T1SEMAPHORIN
LLU|FUN_010839-T1R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG
LLU|FUN_010840-T1
LLU|FUN_010841-T1PROTEIN FAM47B
LLU|FUN_010842-T1
LLU|FUN_010843-T1SEMAPHORIN
LLU|FUN_010844-T1
LLU|FUN_010845-T1MONOCARBOXYLATE TRANSPORTER
LLU|FUN_010846-T1ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE
LLU|FUN_010847-T1TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTOR
LLU|FUN_010848-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_010849-T1ARL14 EFFECTOR PROTEIN
LLU|FUN_010850-T1SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F
LLU|FUN_010851-T1IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB
LLU|FUN_010852-T1
LLU|FUN_010853-T1
LLU|FUN_010854-T1TYROSINE-PROTEIN KINASE RECEPTOR
LLU|FUN_010855-T1
LLU|FUN_010856-T1ACROSIN-RELATED
LLU|FUN_010857-T1
LLU|FUN_010858-T1TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED
LLU|FUN_010859-T1
LLU|FUN_010860-T1TYROSINE-PROTEIN KINASE
LLU|FUN_010861-T1CRUMBS FAMILY MEMBER
LLU|FUN_010862-T1
LLU|FUN_010863-T1
LLU|FUN_010864-T1
LLU|FUN_010865-T1CADHERIN-87A
LLU|FUN_010866-T1CADHERIN-87A
LLU|FUN_010867-T1ARMC5 ARMADILLO REPEAT-CONTAINING -RELATED
LLU|FUN_010868-T1XANTHINE DEHYDROGENASE
LLU|FUN_010869-T1XANTHINE DEHYDROGENASE
LLU|FUN_010870-T1
LLU|FUN_010871-T1TITIN
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