About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_010972-T1
LLU|FUN_010973-T1
LLU|FUN_010974-T1
LLU|FUN_010975-T1
LLU|FUN_010976-T1
LLU|FUN_010977-T1
LLU|FUN_010978-T1BARRIER TO AUTOINTEGRATION FACTOR 2
LLU|FUN_010979-T1
LLU|FUN_010980-T1
LLU|FUN_010981-T1RAG1-ACTIVATING PROTEIN 1
LLU|FUN_010982-T1
LLU|FUN_010983-T1AQUAPORIN OR AQUAGLYCEROPORIN RELATED
LLU|FUN_010984-T1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
LLU|FUN_010985-T1
LLU|FUN_010986-T1
LLU|FUN_010987-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_010988-T1
LLU|FUN_010989-T1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
LLU|FUN_010990-T1SI:CH211-108C17.2-RELATED-RELATED
LLU|FUN_010991-T1
LLU|FUN_010992-T1
LLU|FUN_010993-T1
LLU|FUN_010994-T1SEC61 SUBUNIT BETA
LLU|FUN_010995-T1
LLU|FUN_010996-T1COILIN
LLU|FUN_010997-T1
LLU|FUN_010998-T1
LLU|FUN_010999-T1
LLU|FUN_011000-T1
LLU|FUN_011001-T1
LLU|FUN_011002-T1
LLU|FUN_011003-T1
LLU|FUN_011004-T1PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
LLU|FUN_011005-T1
LLU|FUN_011006-T1
LLU|FUN_011007-T1
LLU|FUN_011008-T1
LLU|FUN_011009-T1UNCHARACTERIZED
LLU|FUN_011010-T1
LLU|FUN_011011-T1
LLU|FUN_011012-T1COLLAGEN ALPHA
LLU|FUN_011013-T1DED DOMAIN-CONTAINING PROTEIN
LLU|FUN_011014-T1NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNIT
LLU|FUN_011015-T1ORGANIC ANION TRANSPORTER
LLU|FUN_011016-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 13
LLU|FUN_011017-T1ZINC FINGER-CONTAINING PROTEIN P48ZNF
LLU|FUN_011018-T1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
LLU|FUN_011019-T1
LLU|FUN_011020-T1
LLU|FUN_011021-T1
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