About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_011124-T1
LLU|FUN_011125-T1
LLU|FUN_011126-T1
LLU|FUN_011127-T1
LLU|FUN_011128-T1
LLU|FUN_011129-T1
LLU|FUN_011130-T1
LLU|FUN_011131-T1
LLU|FUN_011132-T1NEPHRIN
LLU|FUN_011133-T1
LLU|FUN_011134-T1SIN3B-RELATED
LLU|FUN_011135-T1SIN3B-RELATED
LLU|FUN_011136-T1ELONGATION FACTOR TU-RELATED
LLU|FUN_011137-T1OS05G0310600 PROTEIN
LLU|FUN_011138-T1ELONGATION FACTOR TU-RELATED
LLU|FUN_011139-T1ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN 26
LLU|FUN_011140-T1CAMK FAMILY PROTEIN KINASE
LLU|FUN_011141-T1
LLU|FUN_011142-T1
LLU|FUN_011143-T1
LLU|FUN_011144-T1SMALL INTEGRAL MEMBRANE PROTEIN 12
LLU|FUN_011145-T1PA-PL1 PHOSPHOLIPASE FAMILY
LLU|FUN_011146-T1
LLU|FUN_011147-T1
LLU|FUN_011148-T1
LLU|FUN_011149-T1
LLU|FUN_011150-T1PA-PL1 PHOSPHOLIPASE FAMILY
LLU|FUN_011151-T1
LLU|FUN_011152-T1
LLU|FUN_011153-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_011154-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_011155-T1XANTHINE DEHYDROGENASE
LLU|FUN_011156-T1XANTHINE DEHYDROGENASE
LLU|FUN_011157-T1
LLU|FUN_011158-T1
LLU|FUN_011159-T1UNCHARACTERIZED
LLU|FUN_011160-T1ATPASES OF THE PP SUPERFAMILY-RELATED
LLU|FUN_011161-T1MUCIN 4-RELATED
LLU|FUN_011162-T1
LLU|FUN_011163-T1
LLU|FUN_011164-T1UBX DOMAIN CONTAINING PROTEIN
LLU|FUN_011165-T1
LLU|FUN_011166-T1TUBULIN POLYGLUTAMYLASE
LLU|FUN_011167-T1
LLU|FUN_011168-T1SOLUTE CARRIER FAMILY 40 MEMBER
LLU|FUN_011169-T1
LLU|FUN_011170-T1
LLU|FUN_011171-T1SOLUTE CARRIER FAMILY 40 MEMBER
LLU|FUN_011172-T1
LLU|FUN_011173-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
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