About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_011224-T1
LLU|FUN_011225-T1
LLU|FUN_011226-T1
LLU|FUN_011227-T1ZGC:136858
LLU|FUN_011228-T1EG:80H7.2 PROTEIN
LLU|FUN_011229-T1EG:80H7.2 PROTEIN
LLU|FUN_011230-T1EG:80H7.2 PROTEIN
LLU|FUN_011231-T1ZGC:136858
LLU|FUN_011232-T1NUCLEAR PORE COMPLEX PROTEIN NUP1
LLU|FUN_011233-T1GLUTAMINASE
LLU|FUN_011234-T1TGF-BETA FAMILY
LLU|FUN_011235-T1CGI-12 PROTEIN-RELATED
LLU|FUN_011236-T1GEO09665P1-RELATED
LLU|FUN_011237-T1RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN
LLU|FUN_011238-T1UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER
LLU|FUN_011239-T1LIPASE
LLU|FUN_011240-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
LLU|FUN_011241-T1NAD(P) TRANSHYDROGENASE
LLU|FUN_011242-T1NADP-SPECIFIC ISOCITRATE DEHYDROGENASE
LLU|FUN_011243-T1GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN
LLU|FUN_011244-T1EXOCYST COMPLEX COMPONENT SEC6-RELATED
LLU|FUN_011245-T1F-BOX ONLY PROTEIN 5 AND 43
LLU|FUN_011246-T1TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED
LLU|FUN_011247-T1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
LLU|FUN_011248-T1
LLU|FUN_011249-T1
LLU|FUN_011250-T1
LLU|FUN_011251-T1
LLU|FUN_011252-T1
LLU|FUN_011253-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_011254-T1
LLU|FUN_011255-T1
LLU|FUN_011256-T1
LLU|FUN_011257-T1
LLU|FUN_011258-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_011259-T1
LLU|FUN_011260-T1PR DOMAIN ZINC FINGER PROTEIN
LLU|FUN_011261-T1
LLU|FUN_011262-T1
LLU|FUN_011263-T1
LLU|FUN_011264-T1
LLU|FUN_011265-T1
LLU|FUN_011266-T1SPERM-SPECIFIC FAMILY, CLASS Q
LLU|FUN_011267-T1
LLU|FUN_011268-T1GABA-B RECEPTOR
LLU|FUN_011269-T1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
LLU|FUN_011270-T1
LLU|FUN_011271-T1
LLU|FUN_011272-T1
LLU|FUN_011273-T1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
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