About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_011325-T1DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_011326-T1GOLGI SNARE BET1-RELATED
LLU|FUN_011327-T1SERINE PROTEASE INHIBITOR, SERPIN
LLU|FUN_011328-T1
LLU|FUN_011329-T1ECTOPIC P GRANULES PROTEIN 5 HOMOLOG
LLU|FUN_011330-T1LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE
LLU|FUN_011331-T1WD REPEAT CONTAINING PROTEIN
LLU|FUN_011332-T1PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN
LLU|FUN_011333-T1UBX DOMAIN CONTAINING PROTEIN
LLU|FUN_011334-T1
LLU|FUN_011335-T1
LLU|FUN_011336-T1CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
LLU|FUN_011337-T1
LLU|FUN_011338-T1
LLU|FUN_011339-T1UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_011340-T1UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_011341-T1UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_011342-T1UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN
LLU|FUN_011343-T1
LLU|FUN_011344-T1DBX
LLU|FUN_011345-T1
LLU|FUN_011346-T1
LLU|FUN_011347-T1
LLU|FUN_011348-T1ZGC:172139
LLU|FUN_011349-T1
LLU|FUN_011350-T1
LLU|FUN_011351-T1
LLU|FUN_011352-T1ATAXIN-3-RELATED
LLU|FUN_011353-T1RADIAL SPOKEHEAD-RELATED
LLU|FUN_011354-T1SALVADOR FAMILY WW DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_011355-T1UNCHARACTERIZED
LLU|FUN_011356-T1
LLU|FUN_011357-T1
LLU|FUN_011358-T1GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE
LLU|FUN_011359-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 117
LLU|FUN_011360-T1MORN REPEAT-CONTAINING PROTEIN 3
LLU|FUN_011361-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31
LLU|FUN_011362-T1RE45066P-RELATED
LLU|FUN_011363-T1RE45066P-RELATED
LLU|FUN_011364-T1
LLU|FUN_011365-T1
LLU|FUN_011366-T1
LLU|FUN_011367-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_011368-T1
LLU|FUN_011369-T1
LLU|FUN_011370-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_011371-T1
LLU|FUN_011372-T1
LLU|FUN_011373-T1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_011374-T1
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