About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_011072-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
LLU|FUN_011073-T1UNCHARACTERIZED
LLU|FUN_011074-T1PROTEIN CBG05131
LLU|FUN_011075-T1
LLU|FUN_011076-T1CYSTEINE PROTEASE FAMILY C1-RELATED
LLU|FUN_011077-T1
LLU|FUN_011078-T1
LLU|FUN_011079-T1DREV PROTEIN
LLU|FUN_011080-T1
LLU|FUN_011081-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
LLU|FUN_011082-T1
LLU|FUN_011083-T1DEPHOSPHO-COA KINASE-RELATED
LLU|FUN_011084-T1DEDICATOR OF CYTOKINESIS DOCK
LLU|FUN_011085-T1
LLU|FUN_011086-T1
LLU|FUN_011087-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_011088-T1LD44762P
LLU|FUN_011089-T1REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
LLU|FUN_011090-T1
LLU|FUN_011091-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
LLU|FUN_011092-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
LLU|FUN_011093-T1
LLU|FUN_011094-T1
LLU|FUN_011096-T1
LLU|FUN_011097-T1
LLU|FUN_011098-T1
LLU|FUN_011100-T1
LLU|FUN_011101-T1
LLU|FUN_011102-T1TRANSDUCIN BETA-LIKE 3
LLU|FUN_011103-T1
LLU|FUN_011104-T1
LLU|FUN_011105-T1
LLU|FUN_011106-T1LUPUS LA PROTEIN-RELATED
LLU|FUN_011107-T1
LLU|FUN_011108-T1
LLU|FUN_011109-T1
LLU|FUN_011110-T1
LLU|FUN_011111-T1
LLU|FUN_011112-T1
LLU|FUN_011113-T1ALANINE RACEMASE
LLU|FUN_011114-T1ALANINE RACEMASE
LLU|FUN_011115-T1PEPTIDOGLYCAN RECOGNITION PROTEIN
LLU|FUN_011116-T1ALANINE RACEMASE
LLU|FUN_011117-T1PEPTIDOGLYCAN RECOGNITION PROTEIN
LLU|FUN_011118-T1PROTEIN SIDEKICK
LLU|FUN_011119-T1
LLU|FUN_011120-T1
LLU|FUN_011121-T1
LLU|FUN_011122-T1
LLU|FUN_011123-T1
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